Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03749 ATGGCTCAGGTTGTGGCCACGCGATCCATTCAGACCACCCTTTTGTGCCCCACTTCTGGATCTGCACATGACAGGGCTCAGAAGCTGTTAAAGCCTGCAACTTTTGCTTCCAAGGTGCTCCCACCAGAAAGGAACAAGTGCTCCCAAGTTGGCTTCAGAAGCTACCAGATCAGTGCAAGGAAATCAGCACCTGCTGAAGTTATCCCTGTATCACCTGAAGATGATCCAAAGATTGAGGAGCATTTGCAGCATTTGCGTGGCGTGCAGCCACTTGGTGACAGTTCGATTGGAATGTGGTCGAAGCCCACGTTTAGGCGCAAGACAAAGATAGTATGTACTATTGGACCTTCTACTAATACAAAGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCTCGCCTCAATATGTCTCATGGAGATCATGCTTCCCATCAGAAAGTTATTGACTTGGTTAAAGAATACAATGCACAATCCAAGGACAATGTGATTGCAATTATGCTTGACACTAAGGGTCCTGAGGTTAGGAGTGGGGATTTGCCACAGCCAATCACATTAAAAAGTGGGCAGGAATTCACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTATGATGATTTTGTCAATGATGTGGAAGTGGGTGACATGCTTCTTGTAGATGGTGGTATGATGTCTATGACGGTTAAGTCTAAGACACGGGATTCTGTGAAATGTGAAATTGTTGATGGAGGAGAGCTCAAGTCAAGGCGGCATTTGAATGTCAGAGGAAAAAGTGCAACACTACCTTCAATCACTGAGAAGGATTGGGATGATATCAAATTTGGAGTGGATAACAAAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGATGCTGAAGTCGTTCATGAACTGAAGAATTATTTGAAGAGCCGTGATGCTGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCAATACCAAACTTGCATTCAATTATCACCGCGTCTGATGGGGCTATGGTTGCTAGAGGAGATCTTGGTGCTGAGCTCCCTATTGAAGAGGTTCCTCTTTTGCAGGAAGAGATAATCAACTTGTGCCGTAGCATGGGAAAGGCTGTTATTGTTGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACTCCAACAAGAGCAGAAGTATCTGATATAGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTGTCTGGAGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCCACGATCCCAGGTGGTCAAATGCCACCTAATATTGGTCAAGTGTTCAAGAACCACATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCTAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGAACGGGTTTCATGGCTATCCTACTGAGCCACTACCGTCCTTCTGGCACCATTTTTGCTTTTACAGATGAGAAGAGGGTACAACAAAGGCTGGCATTGTATCAAGGAGTCTGTCCTATATACATGGAATTCTGTGATGATTCTGAAGCGACTTTCAGAAGAGCCTTGGATTTATTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTTGCACTTGTACAAAGTGGTAGGCAACCCATATGGAGGTTCCAATCCACTCACAATATCCAGGTCAGAAAAGTGTAA 1728 0.4381 MAQVVATRSIQTTLLCPTSGSAHDRAQKLLKPATFASKVLPPERNKCSQVGFRSYQISARKSAPAEVIPVSPEDDPKIEEHLQHLRGVQPLGDSSIGMWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLKSGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSMTVKSKTRDSVKCEIVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAEVVHELKNYLKSRDADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIINLCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQRLALYQGVCPIYMEFCDDSEATFRRALDLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV. 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03749 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 440 IPR015813 GO:0003824
Seca10g03749 575 NCBIfam pyruvate kinase 106 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 FunFam Pyruvate kinase 176 269 - -
Seca10g03749 575 Pfam Pyruvate kinase, alpha/beta domain 463 555 IPR015795 -
Seca10g03749 575 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Seca10g03749 575 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Seca10g03749 575 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Seca10g03749 575 FunFam Pyruvate kinase 437 556 - -
Seca10g03749 575 Gene3D - 108 433 IPR040442 -
Seca10g03749 575 PANTHER PYRUVATE KINASE 83 553 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 FunFam Pyruvate kinase 271 436 - -
Seca10g03749 575 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Seca10g03749 575 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca10g03749 575 Gene3D - 448 575 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03749 Seca-Chr10 74590805 74604767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03749 K00873 - gmx:100803036 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03749 10 74590805 74604767 Seca10g03749 10 74590805 74604767 ECH