Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03659 ATGGGAACTTCAAATTTACTTGATGTGAAAAATTCTCTAGCTGATTATTTACTTGGGAAGCTTTTCATTGGGTACAATGTGAAGGATAAAAAGGAAATTGTAAACATATTGCTCTATGGGGAGGCTGTCACTAATGTATCTGATGGGAGGATGGATTTTGGTGCAAAAAAGTTTGTGCAAGGTATATCCCTATACGTGGAGGATGGATTTCTCACACAGCTAGAATACCTGAAGTTCTGCAAGGTTGGTAGAAAATACCCAATGTTGCCTATATGGGTTAATAGGAGTGAACCCCATTACACAATAATATTGTTTGTGCATGTCATCTGTGCTTTGATTAGGAATGAACTAGAAGAAAGGAAATCACAGATTAACAATCACAAGGATTTTAATGCACACAAGATCAGAGTAGAGGTGGTGGGTTTCATTAGTGTGGAAGGGTTCCATCAAATTCTCAGAGAAACAAATATCAAACTTCCACAAGAGATGCTTGAGCATCTTTGCAGCGCAGGCTTCTGGCAATTCATTTGGATCTAG 537 0.3836 MGTSNLLDVKNSLADYLLGKLFIGYNVKDKKEIVNILLYGEAVTNVSDGRMDFGAKKFVQGISLYVEDGFLTQLEYLKFCKVGRKYPMLPIWVNRSEPHYTIILFVHVICALIRNELEERKSQINNHKDFNAHKIRVEVVGFISVEGFHQILRETNIKLPQEMLEHLCSAGFWQFIWI. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03659 178 PANTHER UNCHARACTERIZED 31 169 IPR039785 GO:0004843|GO:0071108|GO:1990380
Seca10g03659 178 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 25 124 IPR025257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03659 Seca-Chr10 69943264 69944229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03659 K22647 - gmx:100813222 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03659 10 69943264 69944229 Seca10g03659 10 69943264 69944229 ECH