LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca10g03646	ATGGACCACAGCGCAGATGCACAACGCACGGACTTGATGACCATAACTCGCTTCGTGCTGAACGAGCAATCCAAACACCCTGAATCACGCGGCGATTTCACAATCTTGCTCAATCACATTGTTCTTGGATGCAAGTTTGTCTGTTCTGCTGTCAACAAGGCTGGTCTTGCTAAGCTCATTGGACTTGCTGGGGAGACCAATGTTCAGGGTGAAGAACAGAAGAAACTGGATGTTCTTTCCAATGAGGTTTTCATCAAGGCCCTGATAAGCAGTGGCCGAACATGCATCTTGGTTTCTGAAGAAGATGAGGAGGCAACATTTGTGGAGGCTTCTAAGCGTGGAAAGTACTGTGTTGTTTTTGACCCGTTGGATGGCTCGTCTAACATTGACTGTGGTGTTTCCATCGGAACAATTTTTGGGATTTATATGTTGAAAAATTTCCATGAACCAACCATAGAAGATGTCCTGCAACCTGGGAAGAACATGTTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGCTTGTGTTAAGCACTGGAAGTGGTGTTAATGGCTTCACTCTTGACCCATCACTTGGTGAGTTCATCCTAACTCACCCTGACATTAAGATCCCAAGGAAAGGCAAGATTTATTCAGTGAATGAAGGAAATGCCAAAAACTGGGATGGCCCTACTGCCGCCTATGTGGAGAAATGCAAGTTTCCAAACGATGGTTCATCACCAAAGTCTCTAAGATATATTGGAAGGTATTATAAATTCTTAACCCTTGAGGTAGTCTAA	783	0.4432	MDHSADAQRTDLMTITRFVLNEQSKHPESRGDFTILLNHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALISSGRTCILVSEEDEEATFVEASKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMLKNFHEPTIEDVLQPGKNMLAAGYCMYGSSCTLVLSTGSGVNGFTLDPSLGEFILTHPDIKIPRKGKIYSVNEGNAKNWDGPTAAYVEKCKFPNDGSSPKSLRYIGRYYKFLTLEVV.	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca10g03646	260	PIRSF	FBPtase_SBPase	9	251	IPR000146	GO:0005975\|GO:0016791
	Seca10g03646	260	Gene3D	-	4	203	-	-
	Seca10g03646	260	Gene3D	-	204	253	-	-
	Seca10g03646	260	PANTHER	FRUCTOSE-1,6-BISPHOSPHATASE-RELATED	3	250	IPR000146	GO:0005975\|GO:0016791
	Seca10g03646	260	Pfam	Fructose-1-6-bisphosphatase, N-terminal domain	13	201	IPR033391	-
	Seca10g03646	260	PIRSF	FBPtase	9	251	IPR028343	GO:0042132
	Seca10g03646	260	PRINTS	Fructose-1,6-bisphosphatase signature	75	101	IPR028343	GO:0042132
	Seca10g03646	260	PRINTS	Fructose-1,6-bisphosphatase signature	38	65	IPR028343	GO:0042132
	Seca10g03646	260	PRINTS	Fructose-1,6-bisphosphatase signature	155	178	IPR028343	GO:0042132
	Seca10g03646	260	PRINTS	Fructose-1,6-bisphosphatase signature	186	209	IPR028343	GO:0042132
	Seca10g03646	260	PRINTS	Fructose-1,6-bisphosphatase signature	212	239	IPR028343	GO:0042132
	Seca10g03646	260	SUPERFAMILY	Carbohydrate phosphatase	8	250	-	-
	Seca10g03646	260	CDD	FBPase	20	249	IPR000146	GO:0005975\|GO:0016791
	Seca10g03646	260	Pfam	Fructose-1-6-bisphosphatase, C-terminal domain	205	250	IPR044015	-
	Seca10g03646	260	FunFam	Fructose-1,6-bisphosphatase, cytosolic	4	203	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca10g03646	Seca-Chr10	69738398	69744040	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca10g03646	K03841		-	gmx:100815943	481.87

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca10g03646	10	69738398	69744040	Seca10g03646	10	69738398	69744040	ECH
	Seca10g03646	10	69738398	69744040	Seca10g03646	10	69738398	69744040	PCT