Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03616 ATGCGCACTACAACAGAATATCAAGGTTCTATTCTGAGTCTCCGTGGTGCTCAGGTTCACACCATGGAAGGTTCAAGCTTGGAACACGAGCTTGATTCTTTTCAGAAACAGGTCACTGACCGGTTCAATGAGCTATCTTCAGTTACAAACGATGACTTGCTTTCTCTCTCATGGGTTAGGAAGCTCCTTGATTCATTCCTCTGTTGCCAAGAGCAATTCAGGATGATTCTCCACAACCACAAAGCACAAGTGTGGAAACCCCCTTTGGATCGCATGGTGGCTGATTTTTTTGAGAGGAGTGTGAAGGCACTGGATGTTTGCAATGCCATCCGTGATGGAATTGAACAGATTAGGCAATGGCAGAAGCTGTTAGAGATTGTTCTATGTGCTTTGGATAATAAGAGAAGCATTGGTGAGGGCCAATTTAGGCGTGCAAAGAAAGCTCTTGTTGATTTGGCAATTAGCATGCTAGATGACAAGGATTCAAGTGCTTCTTCTATTTCACATAGAAACAGGTCATTTGGTAGAAACACTGCAAGCAGGGATCATCATCATCACCATCATCAACATCAACATGGTTCATCTTCATCAATTGCTCATTTTAGATCACTTTCTTGGAGTGTGTCACGGAATTGGTCTGCAGCAAGGCAGCTCCAAGCAATTGGGAACAACCTTTGCCCTCCTAAGACCAGTGAACTTGTGGCTTCCAATGGCCTTGCTTTGCCTATTTATACAATGAATTCTATTCTCTTGTTTACAATGTGGGCTCTTGTGGCTGCAATTCCTTGTCAAGACCGTGGGTTGCACCTCCATTTTTCGATTCCGCGGCAGCTTCCGTGGGCTGCTCCGGTGGCCTCACTGCATGAACGAATTTTGGAGGAGTCCAAGAAGAGGGAGAGGAAGAATTCTTGTGGCTTGCTGAGGGAGATTCAGCAAATTGAGAAATGTGCTAGGGTGATGAATGAGTTGTCTGATTCTGTGCAGTTTCCTTTGAGTGAGGAGAAAGGGGAGCAGGTTAGGCAGAGAGTGCAAGATGTTGTGCATGTTTGTGAAGCCTTGAAAGATGGATTGGACCCTTTAGAACGCCAAGTGAGAGAGGTTTTCCACAGAATTGTGCGCAGCAGAACAGAGGGGCTTGACTCTTTTGGTAGGGAGTGA 1158 0.4551 MRTTTEYQGSILSLRGAQVHTMEGSSLEHELDSFQKQVTDRFNELSSVTNDDLLSLSWVRKLLDSFLCCQEQFRMILHNHKAQVWKPPLDRMVADFFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLCALDNKRSIGEGQFRRAKKALVDLAISMLDDKDSSASSISHRNRSFGRNTASRDHHHHHHQHQHGSSSSIAHFRSLSWSVSRNWSAARQLQAIGNNLCPPKTSELVASNGLALPIYTMNSILLFTMWALVAAIPCQDRGLHLHFSIPRQLPWAAPVASLHERILEESKKRERKNSCGLLREIQQIEKCARVMNELSDSVQFPLSEEKGEQVRQRVQDVVHVCEALKDGLDPLERQVREVFHRIVRSRTEGLDSFGRE. 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03616 385 PANTHER BPS1-LIKE PROTEIN 10 381 - -
Seca10g03616 385 MobiDBLite consensus disorder prediction 162 197 - -
Seca10g03616 385 Pfam Protein ROH1-like 4 381 IPR008511 -
Seca10g03616 385 MobiDBLite consensus disorder prediction 179 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03616 Seca-Chr10 68022166 68023323 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03616 - - gmx:100806977 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03616 10 68022166 68023323 Seca10g03616 10 68022166 68023323 ECH
Seca10g03616 10 68022166 68023323 Seca10g03616 10 68022166 68023323 PCT