Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03605 ATGGGATTGGATATTTTTCCAAATCCCAGAGAATTATTGGAAGGTTTTGATAGCAAACAGAAGAAAAATCTCAGGCAAATGGGTGATGATGAGTTGGTGACAGCTGACATCAATTCTCAAGATAAAATTTTTGATTCAGATTATTCTAAGAAGGCGGAGGATTGGAAGGAAAATTTGGGGCAGAAATCATCAGAAGTCAGTTCTTCACCTCAAATAGGTTTGGACCATTTCATCATCGAGCCTGTTGGAACTGAGAGGAACCTGCATATTGCAGATCATGAGATTATGCTTTCTCGATCAATGATGGAGAAATGGGGTTCTCCAAGGGATGACCTAATGCTAGACAGGCTGTCAGAGAATGAGAAGCAAAAGCTGATTGTTAACCTATTGAAGATGCAAAATGATGGGACTGTTGAAGTTGACCTAGAAAAAAGTGCACCTGTTGCATCAGAATTGTTGGAGCTCCAATCTTATGAAGAGTCAACAGTGAGTGGAACTATTATTTCTGAATCAAAAAAATTAGTTCCCAGGTTACAAATTGTCATTCTTGTGGTTGGAACTAGAGGCGATGTACAACCTTTCCTGGCCATTGCAAAAAAACTTCAGGAATATGGTCATCATGTTAGGTTGGCAACTCATGCTGATTTTGACTCATTTGTAAAGTCTGCTGGTGTAGATTTCTATCCTTTGGGTGGTGATCCTCGTGCTTTGGCAGGATATATGGTGAGGAATAAAGGTTTAATCCCATCTGGTCCCACTGAAATATCCATCCAAAGAAAGCAGCTGAAGGCCATTATTGATTCTCTTCTTCCAGCATGCACAGGACCTGATTTGGAAACCGGTGTTCCTTTCAGAGCTCAGGCTATTATTTCCAACCCTACTGCTTGTGGACATGTACATGTTGCTGAAGCCCTTGGGGTGCCCCTACATATCTTCTTCACAATGCCTTGGACGCCAACATATGAGTTCCCACACCCTTTGGCACGTGTTCCTCAAAGTGCTGGTTATTGGCTGTCCTATATAATTGTGGATCTTCTGATATGGTGGGGGATACGAGGAATTATCAATGACTTCAGGAAAAGGAAATTGAAGCTTGCTCCTATTGCATACTTCAGTATGTACCATGGATCAACATCTCATTTACCAACTGCCTATATGTGGAGTCCTCATGTTGTTCCAAAACCTAGTGACTGGGGCCCTTTAGTTGATGTTGTTGGTTATTGTTTCTTAAACCTTGGATCAATGTATCAACCACGGGAAGATTTTGTACGATGGATTCAAAAAGGACCAAAACCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGAAGATCCTAGAGGAACTACTGATGTTATAATGGAGGCACTAAAGGATACAGAACAACGGGGAATTATTGACCGGGGCTGGGGAAATCTAGGGAACCTGGCAGAAGTTCCTGACAATGTTTTCCTTCTAGAGGAATGCCCTCATGACTGGTTGTTTCCTCAGTGTTCTGCAGTGGTGCATCATGGTGGAGCTGGAACTACAGCTACAGGACTAAAAGCTGGGTGTCCAACAACCATCATCCCATTTTTTGGAGATCAGTTCTTTTGGGGAGATAGAATATATGAGAAAGGGCTTGGACCAGCCCCTATTCCAATTTCTCAGCTCAGTCTCGAACATTTATCAAATGCCATAAAATTCATGCTCCAGCCAGAGGTAAAATCTCGAGCAATGGAAATTGCTAAGTTGATTGAGAATGAAGATGGTGTTGCAGCTGCAGTTGATGCATTTCACCGCCATCTACCTCCTCAGCTACCACTGCCAACTCCATCTCCAGTGGAGGAGGACCATGCAAATCCTTTGCAGTGGTTTTTTCTCCGGCTTGCCAAGTTGTGCTGTTTGCCTTGTGGTGGTGTATAG 1902 0.4274 MGLDIFPNPRELLEGFDSKQKKNLRQMGDDELVTADINSQDKIFDSDYSKKAEDWKENLGQKSSEVSSSPQIGLDHFIIEPVGTERNLHIADHEIMLSRSMMEKWGSPRDDLMLDRLSENEKQKLIVNLLKMQNDGTVEVDLEKSAPVASELLELQSYEESTVSGTIISESKKLVPRLQIVILVVGTRGDVQPFLAIAKKLQEYGHHVRLATHADFDSFVKSAGVDFYPLGGDPRALAGYMVRNKGLIPSGPTEISIQRKQLKAIIDSLLPACTGPDLETGVPFRAQAIISNPTACGHVHVAEALGVPLHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGIRGIINDFRKRKLKLAPIAYFSMYHGSTSHLPTAYMWSPHVVPKPSDWGPLVDVVGYCFLNLGSMYQPREDFVRWIQKGPKPLYFGFGSMPLEDPRGTTDVIMEALKDTEQRGIIDRGWGNLGNLAEVPDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIIPFFGDQFFWGDRIYEKGLGPAPIPISQLSLEHLSNAIKFMLQPEVKSRAMEIAKLIENEDGVAAAVDAFHRHLPPQLPLPTPSPVEEDHANPLQWFFLRLAKLCCLPCGGV. 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03605 633 CDD GT1_Gtf-like 180 594 IPR002213 GO:0008194
Seca10g03605 633 Gene3D Glycogen Phosphorylase B; 180 583 - -
Seca10g03605 633 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 49 624 - -
Seca10g03605 633 Pfam Glycosyltransferase family 28 N-terminal domain 180 323 IPR004276 GO:0005975|GO:0016758|GO:0030259
Seca10g03605 633 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 180 595 - -
Seca10g03605 633 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 409 578 - -
Seca10g03605 633 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 434 577 IPR002213 GO:0008194
Seca10g03605 633 Gene3D Glycogen Phosphorylase B; 409 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03605 Seca-Chr10 67705671 67720892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03605 200 633 Glycosyltransferase AT1G43620 79.909 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03605 K05841 - gmx:100797391 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03605 10 67705671 67720892 Seca10g03605 10 67705671 67720892 ECH
Seca10g03605 10 67705671 67720892 Seca10g03605 10 67705671 67720892 PCT