Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03601 ATGGATTCACTTGCACTGCGTTTACGGTATCCATTCATTCTCAGCACCAACAACAACCACCACCATCACCACCGCAAAACACTCTCCTTCTTCAACAACACAACCTTCTCTCACTTTCGCTCTCTCTCCACGAACCCTACCACTCACACTCGCGGGTGTTTCAAGCTGGAAGCAAGCAAGACCTTCGACGAGGCTGCTTTCGAGGCTGAGAGGCTCGCCCTTGACGCGGAGGCTCGCCAAGCCATGGCGGAGGAGGAGGCTTCCCTCCGAGAGGATCCGAAAGCTTGGAAATGGCTGATCCGAAAGCGAATATGGGATGCGATGGAAGCCCACAACTTCGCCCAAAACCCGAGACCCGTTCACCACAGGATTCCCAATTTTGTTGGCGCTTCTGTTGCCGCTGAAAAGATGAGGGGGCTAGATGTGTTTCGTGTTGCACAATGTGTGAAGGTTAATCCAGATTCTCCTCAGAAACAAGTCAGGTTTCTTACTCTCTCAGATGGAAAAAAGTTACTAACTCCTCAGCCACGACTAAGGACAGGATTTTTCTCTGTACTTGAATCTGATATGTTAACTACGGGCACCATCAAGGAAGCCTGCACTTCTGTTGGGGTGGCCAAGTATGGACGGCCAATTGGGTTAGATGAAAAGATAAAGGTAGATCTTATTGTTATTGGATCTGTTGCTGTTGACCCAAGGACAGGTGCTCGATTAGGAAAGGGAGAGGTACAGTTACATATCTTACTTTTCTTGTGGTCGTGTTTAATCTCCTGTTCATTTGCTCACTTATCCATTAAAGGGATAGAACTAAAAATTACACTGTATTTGCTTCGCAACCTGAGTTTAAAAGTATGCTTTGACATGCTATTTGTTTAA 876 0.468 MDSLALRLRYPFILSTNNNHHHHHRKTLSFFNNTTFSHFRSLSTNPTTHTRGCFKLEASKTFDEAAFEAERLALDAEARQAMAEEEASLREDPKAWKWLIRKRIWDAMEAHNFAQNPRPVHHRIPNFVGASVAAEKMRGLDVFRVAQCVKVNPDSPQKQVRFLTLSDGKKLLTPQPRLRTGFFSVLESDMLTTGTIKEACTSVGVAKYGRPIGLDEKIKVDLIVIGSVAVDPRTGARLGKGEVQLHILLFLWSCLISCSFAHLSIKGIELKITLYLLRNLSLKVCFDMLFV. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03601 291 PANTHER 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED 80 242 IPR002698 -
Seca10g03601 291 SUPERFAMILY NagB/RpiA/CoA transferase-like 96 242 IPR037171 -
Seca10g03601 291 Pfam 5-formyltetrahydrofolate cyclo-ligase family 97 242 IPR002698 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03601 Seca-Chr10 67656391 67665460 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03601 K01934 - gmx:100797707 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03601 10 67656391 67665460 Seca10g03601 10 67656391 67665460 ECH