Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03585 ATGGCAGCGAAGCGCGTGTACGAAGCATGGAAAGGAAGTAATAAATTTCTATTTGGAGGAAGGTTGATATTTGGGCCTGATGCTAGGTCACTGCTTGTCACCTTGTTGCTGATTATTGTTCCGGTTATCGTCTTTTGCGTATTTGTAGCAAGGCATCTTCGGCATGAATTTTCATCATATAATGCAGGATATGCTATTTTGGTGGTGGCAGTTCTCTTTAATATTTATGTGCTGATTCTTCTCTTTCTTACTTCCTCACGTGATCCGGGAATTATTCCGAGGAATTTACATCCACCAGAGGAAGAGTTCCGTTATGATTCTTCAGTTTCTGCTGATGTTGGGGGACGGCAAACACCAAGCCTACAGTTCCCTCGAACAAAAGAAGTAATGGTCAATGGGCTTCCTGTAAGGGTGAAGTATTGTGAAACTTGTATGCTGTATCGTCCTCCTCGTTGTTCGCATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCTTGGGTTGGCCAATGTATTGGACTGAGGAACTACCGTTACTTCTTTCTGTTTGTTTCTTCGGCAACTGTTCTATGTATATATGTCTTTTCCATCTCAGCATTTTACATCAAGGTTCTGATGGATCAATATCAAGGGACAGTTTGGAAGGCAATGAAAGAATCACCTGCATCTGTTATACTAATGGCATACTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTAACTGGTTTTCATTTGTACCTTATTGGCACAAATCAGACTACCTATGAGAACTTCCGATATAGAGCTGATAACAGGATCAATGTTTATAATCGGGGTTGTTTAAATAATTTTCTGGAAGTATTTTGTACAAAAGTGAAGCCTTCAAGGAACAATTTCCGGTCTTTTGTTCAAGAGGAGGTACAGAGGCCACCCCCTCCAGTCATTGCCCGGGAACCTGAAACTGATTTGGGTGGAGATCCTCGTCCAAAGGTTGAAGATGATCTAGATATTGGTGAAGACCTATTAAAGATATCACAGCGTCGGAATATTGAAGACATTGATGAAGACATTCGGAGTAGAGGGAGTAATGGACCTCCCCGCAATACATCAGATGCTGATTCAGTTCTGGGTTCAGATCGTCGGGCTCCAACAATTCGATCTGACGCAAGGCACTCGAGTTGGGGAAGAAGCGGAAGCTGGGAAATTGCTCCAGAGGTCCTTGCCAATTCGAATGTAACTGAAACTAGAAGCTATGTTGCTTCAAAGGAGGTGCACCAATGA 1272 0.4253 MAAKRVYEAWKGSNKFLFGGRLIFGPDARSLLVTLLLIIVPVIVFCVFVARHLRHEFSSYNAGYAILVVAVLFNIYVLILLFLTSSRDPGIIPRNLHPPEEEFRYDSSVSADVGGRQTPSLQFPRTKEVMVNGLPVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFLFVSSATVLCIYVFSISAFYIKVLMDQYQGTVWKAMKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADNRINVYNRGCLNNFLEVFCTKVKPSRNNFRSFVQEEVQRPPPPVIAREPETDLGGDPRPKVEDDLDIGEDLLKISQRRNIEDIDEDIRSRGSNGPPRNTSDADSVLGSDRRAPTIRSDARHSSWGRSGSWEIAPEVLANSNVTETRSYVASKEVHQ. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03585 423 Pfam DHHC palmitoyltransferase 139 263 IPR001594 GO:0016409
Seca10g03585 423 ProSiteProfiles DHHC domain profile. 139 189 - -
Seca10g03585 423 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 37 303 - -
Seca10g03585 423 MobiDBLite consensus disorder prediction 350 393 - -
Seca10g03585 423 MobiDBLite consensus disorder prediction 300 334 - -
Seca10g03585 423 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03585 Seca-Chr10 67179482 67187680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03585 65 285 Lipid Metabolism Gene Families AT4G22750 28.017 2.13e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03585 K16675 - gmx:100818705 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03585 10 67179482 67187680 Seca10g03585 10 67179482 67187680 ECH
Seca10g03585 10 67179482 67187680 Seca10g03585 10 67179482 67187680 PCT