Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03548 ATGGCCATAAAGGCATTTGAATTGCTGAAAAGCTTCACGTCCCATGAAGAGATAATGCAAGTTCTTGCAGCAGTGGCTGCAGATTTGGGAGATGTAATTGCTGATGTGAGTTCTGTTGAGGTGAAACCTATGAAAGGAGCAATGACCAATGAGGTTTTTGAGGTAAATTGGCCAACAAAAAGTGATGGTCATGTGAGAAAGGTTCTGGTTCGATTATATGGGGAAGGTGTTGAGGTTTTCTTCAACAGGGTCAATGAAATCCAAACCTTTGAATGCATGTCAAAGCATGGACAGGGTCCACGCCTTCTTGGTCGGTTCACCACTGGTAGAGTTGAGGAGTTCATTCATGCCAGAACACTCTCAGCTGCTGACCTTCACGACCCTGAAATATCCTCTTTGATAGCATCTAAGATGAATGAATTTCACAATCTTCATATGCCTGGTGAAAAAAAGGCTCAGCTTTGGCAGAGAATGAGGAACTGGCTTAATCATGCCAAAAGTTTGTGCTCCTCAAATGATATAAAGAATTTTAATCTGGATAATCTTGATGCTGAAATAAATATGCTGGCGGAGGTTTTATCTAAAGGATATCAAGAGATTGGATTTTGTCACAATGACCTACAATATGGTAACATAATGATAGATGAAGAGACAAGATCAATCACTTTAATTGACTACGAATATGCCAGTTACAATCCTGTTGCGTATGACCTGGCAAATCATTTCTGTGAGATGGCGGCAAATTACCATAGTGACACACCCCATGTTCTTGACTACAGTAAATATCCTGGTCAGGAGGAGCGTCAAAGGTTTATTCATATTTATTTGAGTTCTGAAGGCAAGAAGCCAAGCGACGCTGAAGTGGAGCAGTTACTGAATGCTGCTGAAAAATACACTCTTGCAAACCATATATTTTGGGGCTTGTGGGGACTTATTTCGAGTTATGTAAATACAATTGACTTTGACTATAAGGAGTATGCAAGGCAGAGGTTTCAGCAATACTGGTTAAAGAAGCCTACTTTATTGGACTCACCATAA 1038 0.4037 MAIKAFELLKSFTSHEEIMQVLAAVAADLGDVIADVSSVEVKPMKGAMTNEVFEVNWPTKSDGHVRKVLVRLYGEGVEVFFNRVNEIQTFECMSKHGQGPRLLGRFTTGRVEEFIHARTLSAADLHDPEISSLIASKMNEFHNLHMPGEKKAQLWQRMRNWLNHAKSLCSSNDIKNFNLDNLDAEINMLAEVLSKGYQEIGFCHNDLQYGNIMIDEETRSITLIDYEYASYNPVAYDLANHFCEMAANYHSDTPHVLDYSKYPGQEERQRFIHIYLSSEGKKPSDAEVEQLLNAAEKYTLANHIFWGLWGLISSYVNTIDFDYKEYARQRFQQYWLKKPTLLDSP. 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03548 345 CDD ETNK_euk 39 335 - -
Seca10g03548 345 Gene3D Phosphorylase Kinase; domain 1 36 114 - -
Seca10g03548 345 PANTHER CHOLINE/ETHANOALAMINE KINASE 15 343 - -
Seca10g03548 345 Gene3D - 74 335 - -
Seca10g03548 345 SUPERFAMILY Protein kinase-like (PK-like) 35 341 IPR011009 -
Seca10g03548 345 Pfam Choline/ethanolamine kinase 66 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03548 Seca-Chr10 65682549 65686971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03548 1 344 Acyl Lipid Metabolism Gene Families AT1G71697 62.717 3.13e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03548 K14156 - gmx:547972 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03548 10 65682549 65686971 Seca10g03548 10 65682549 65686971 ECH
Seca10g03548 10 65682549 65686971 Seca8g07232 8 168665725 168670951 PCT