Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02918 ATGGGCACGGTTGAAACTCAGTCCCAGCCACTCTCTGAGGTTTCATCTCCTTTGGCAGACAACGCTAAGGTTCAAGGTTCAAAGCAGGAAAAGAGTGAGCTCAGGGAAGCTCTTGGCACTTTGAGAGGTGAGGATGTGGTTCCTGCGAATGGGGTTGGGTTTTCTAGTGTTGGAGACCAAGGTTTGGGTAATGATGGGGTTGTTGAAGTTGTCAAGAGTAGTGTCTTTGAGAGCAGGGTTTCGGTTCTGAGGGACAACGATTGTCAAGTTTTTGCTGATTCTGAGATGAATGGGGTGTCCTCTTTGTTGCAAATGCGAGAAAGTGGTGGAAGCCCTGTGCTTTCATGTGAGGGTGCTGAGAAGTTGGATAGTTCTTGTGCTTCTGAGAGAAGAGTAGCAGAAGCTGCTGTTTTGAGTGAGGATGGTACAGTAAGGGCTGATGGGGAAGACACAAGAGATGGGAAGAAAAATGAGGAGGGAAAAAACGATGATGGTTGTGATGGGAAAATTGTGACTATAGAGGTTCCAATAGTAGATACAAGTGAGAACATGGATGTAGAAGTGGAGGATTTGAGTGATCAAGGGTATGAATTTTCTGTTGGTGATTTTGTTTGGGGTAAAATTAAGAGTCATCCTTGGTGGCCTGGCCGGGTTTATGACCCTTCTGATGCATCAGACTTTGCTTTGAAGCTGAAACAAAAGAATAGACTCCTAGTGGCATACTTTGGGGATGGAACCTTTGCTTGGTGCCATCCATCACAATTAAAGCCTTTAGAGGAGAACTTTGATGATATGGTGAAACAGAGTAGCTCCAGACCTTTTGTCAATGCTGTACAAGAAGCTGTATGTGAGGTTGGAAGGCTTCTGAATATGAAGTTGTGTCATTCATCTGTTGTGAAGAAAACTATGTCTGAATCCGCTCCACTGTTGGCGAAAAATTCTGGAATCAAGGAAGGAGTTATTGTGCCTGAAAGTGGCATAGAGAGACTTTCAGCTGTTCCAATTGAACCAGTTGAATTACTTTCTCGAGTGAAACAAATTGCAGAAATTATTGATATGTCTAGTATTCTGGAGCTGGAGATATTAAAGGCTCATCTTTCAGCCTTTTATCTATCAAGAGGAGGTTATAAATTACCTGATTATGAGGATCCCCAGCCGGTTCCTGGACTTGAGGGTAGTCTAATGGATGAAATGGTTGATGTAGGTACAAGTAAGAGAGCAGTGGTAGCACCTGTCCAAGGGCCATTTGAAGAGGATTACTCTATCTTGCCTGTGAACCCAAAAATTGGTGATCTGTGTCACTCTCCAGGGCTTTCAGGAAATAGATTCAATCATAAAAGAAAGCAGAAAAGCATTGCTGAAATTATGGGGGAGGACAAAGATGTTCATACCAAAAATATGGAGGGTGATGCAAATGATGAAGCGGTTGATGCAATTGGGTCAGGTGGTGGAAAGAAGGGAAAAGGTAGTGAGGATGCAATGGCAGCTAAACCAGTTCAGAAGAGAAAAAAGTTGCATGTAAATACTGATAGAAATGTTCTAAGTGCTGAAAATGATGACAGTGGGGGCAAGGAAAACAGTGACAAGGGCACATCGTTGCGGTCAAACAAGAAAAGAGAAGCTTTTGGCAATGAAAACATTAGCACTGTGAGCAAAACGGAAACTGATGAATGGAAGACCAAAGCACAAAATGAGAAGGGTTCTTTGTCAAGAGAAAGGAAGAAAAGTAAGTACTTGTCCCCTCCCTTCACTACTTCAATTGGGGAGCTTATGCAGGAAAATACAGAAACAGAATCCCTCAATGACGTGGCATCTCAGGAGAATTTCTCCCAGGAAGGTTCCTTAGAGCAGGAGCTTTCTGATAGCTCAAATTACCTAACACAAGATGATGAGAACAAGACCATTGATCCAAAGAAAATTGAGGCTTCTTCATTGGAAGTGCTGTCCGAAATCCGGTATGCAGCTATTAGTCAAAAAATTCCTAGAGAAAGCAAATTTGTGGACTTCATTTCTGTCTTCAGAAGTTCATTATATCACCAAGGATCACTATACAAAGTATACAAGAAATATCAACCTGGAAGGAAAAGAAAGAAGCCGGAATCTGAACTTGGGGTGCTGATGAATAATGAAAATGAATCTGATAATGTATCACCTAATCAAGATTCTGAGCCACTGAAGAGAAGAAGGAAGGAGACAACTCCAAGCATGCCAAAAGTGAAGAGCACTCCTGAAACTAAGACTGTTAAGAAGGGAACTGATGAGAAAGCTACAGCTGCTATGCTTTTTGTGTCATTTTGGCCAGGATCCTCTCTGCCTTCAAAATCTGATCTCATCACAGTGTATAGTAAGTTTGGAGCTCTGAATGAAGCAGAAACAGATATGTTCCGTACTAATTACACTGCTAGAGTTTCTTTCCTAAGAACATGTGATGCTGAAGAGGCAATTAACCATTCACAAAAGGAGAACCCTTTTGAATCTTCTGAAGTCACTTTTCAGCTCCAGTATGTTTCTCCTGGATCCATGTCTGGGAAACATTGTGAAAGATCAAAGTCCAAACCTTTGCCAACCAAGAAGAGAGACAAGACTCTAGCTACACCATCTGTTTCACTGTCACAGGGTAGTGAAGTGTCTAAATTGAACTTCATAAAACATAAACTTGAAGGTCTGGCCTCGATACTAGAATCATCAGATGGCAAATCAGCAGATGATTTGAAGACAAAATTAGACAGCAAGGTGAAAAGTCTTTTGGAGGATGTGAACAAAATGGTTGAATCTTCTTCCTCCTAA 2787 0.418 MGTVETQSQPLSEVSSPLADNAKVQGSKQEKSELREALGTLRGEDVVPANGVGFSSVGDQGLGNDGVVEVVKSSVFESRVSVLRDNDCQVFADSEMNGVSSLLQMRESGGSPVLSCEGAEKLDSSCASERRVAEAAVLSEDGTVRADGEDTRDGKKNEEGKNDDGCDGKIVTIEVPIVDTSENMDVEVEDLSDQGYEFSVGDFVWGKIKSHPWWPGRVYDPSDASDFALKLKQKNRLLVAYFGDGTFAWCHPSQLKPLEENFDDMVKQSSSRPFVNAVQEAVCEVGRLLNMKLCHSSVVKKTMSESAPLLAKNSGIKEGVIVPESGIERLSAVPIEPVELLSRVKQIAEIIDMSSILELEILKAHLSAFYLSRGGYKLPDYEDPQPVPGLEGSLMDEMVDVGTSKRAVVAPVQGPFEEDYSILPVNPKIGDLCHSPGLSGNRFNHKRKQKSIAEIMGEDKDVHTKNMEGDANDEAVDAIGSGGGKKGKGSEDAMAAKPVQKRKKLHVNTDRNVLSAENDDSGGKENSDKGTSLRSNKKREAFGNENISTVSKTETDEWKTKAQNEKGSLSRERKKSKYLSPPFTTSIGELMQENTETESLNDVASQENFSQEGSLEQELSDSSNYLTQDDENKTIDPKKIEASSLEVLSEIRYAAISQKIPRESKFVDFISVFRSSLYHQGSLYKVYKKYQPGRKRKKPESELGVLMNNENESDNVSPNQDSEPLKRRRKETTPSMPKVKSTPETKTVKKGTDEKATAAMLFVSFWPGSSLPSKSDLITVYSKFGALNEAETDMFRTNYTARVSFLRTCDAEEAINHSQKENPFESSEVTFQLQYVSPGSMSGKHCERSKSKPLPTKKRDKTLATPSVSLSQGSEVSKLNFIKHKLEGLASILESSDGKSADDLKTKLDSKVKSLLEDVNKMVESSSS. 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02918 928 MobiDBLite consensus disorder prediction 143 165 - -
Seca10g02918 928 SUPERFAMILY Tudor/PWWP/MBT 195 301 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 490 510 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 721 735 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 845 859 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 552 578 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 517 541 - -
Seca10g02918 928 SMART PWWP_4 198 259 IPR000313 -
Seca10g02918 928 MobiDBLite consensus disorder prediction 706 720 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 456 472 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 138 165 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 838 869 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 579 630 - -
Seca10g02918 928 PANTHER ALDOLASE-RELATED 24 854 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 456 635 - -
Seca10g02918 928 Gene3D - 188 291 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 1 33 - -
Seca10g02918 928 MobiDBLite consensus disorder prediction 706 751 - -
Seca10g02918 928 Pfam PWWP domain 201 281 IPR000313 -
Seca10g02918 928 ProSiteProfiles PWWP domain profile. 200 261 IPR000313 -
Seca10g02918 928 MobiDBLite consensus disorder prediction 1 25 - -
Seca10g02918 928 CDD PWWP 201 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02918 Seca-Chr10 38948999 38953023 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02918 - - lja:Lj2g3v0970440.1 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02918 10 38948999 38953023 Seca10g02918 10 38948999 38953023 ECH