Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02796 ATGGAGAGCTCGGAGAAGGTGGTTGCTGTGATTATGGTGGGTGGACCCACTAAAGGGACCAGATTTCGGCCTCTTTCCTTCAATACTCCCAAACCCCTTTTCCCTGTGGCTGGCCAGCCAATGGTTCATCACCCTATTTCTGCTTGTAAAAGGATACCCAATTTGGCTCAAATATATCTTATTGGATTCCATGAGGAGCGAGAGTTTGCTCTATATGTCTCTTCAATTTCAAATGAGCTGAAATTACCAGTAAGATATTTGAAGGAGGATAAACCACATGGTTCAGCAGGTGGCCTTTACTACTTCAGAGATATTATCATGGAAGACAGCCCATCACATATATTTCTGCTAAATTGTGATGTTTGCTGCAGTTTTCCACTACCATCCATGCTTGATGCCCATAGAAAATATGGTGGGATGGGGACAATGTTGGTAATCAAGGTTTCAGCTGAATCTGCTAACCAGTTTGGTGAGTTGGTTGCTGATCCAAACACTCATGAATTGCTGCATTATACTGAGAAACCTGAAACATTTGTTAGCGATTTGATAAACTGCGGTGTCTACATTTTCACTCCTGATATCTTTAATGCCATTCAAAATGTATCTATGAATCGAGAAGGGAGAGCTAATCTACGACGTCTCTCCAGCTTTGAAGCTCTCCAATCTGCCACAAGGACTCTTCCTACAGATTTTGTAAGACTGGATCAAGATATTCTGTCACCTCTAGCTGGAAAGAAGCAACTGTATACATATGAGACAAAGGATTTCTGGGAGCAAATCAAAACTCCAGGAATGTCTTTGAAATGCTCAGAGTTGTATCTTTCTCAATTCCGGTATACTTCACCCGATCTTTTGGCTAGTGGAGATGGTAAAAGGAATGCTACAATTGTTGGTGAAGTATATATTCATCCATCTGCAAAAGTTCATCCATCTGCAAAGGTAGTTCCATTCTTGCCTACACAAGATTATAAATCCTTTCCTCTTTTAGACAAAAATTAA 999 0.4064 MESSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPVAGQPMVHHPISACKRIPNLAQIYLIGFHEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPSMLDAHRKYGGMGTMLVIKVSAESANQFGELVADPNTHELLHYTEKPETFVSDLINCGVYIFTPDIFNAIQNVSMNREGRANLRRLSSFEALQSATRTLPTDFVRLDQDILSPLAGKKQLYTYETKDFWEQIKTPGMSLKCSELYLSQFRYTSPDLLASGDGKRNATIVGEVYIHPSAKVHPSAKVVPFLPTQDYKSFPLLDKN. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02796 332 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Seca10g02796 332 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Seca10g02796 332 SUPERFAMILY Nucleotide-diphospho-sugar transferases 5 310 IPR029044 -
Seca10g02796 332 CDD M1P_guanylylT_A_like_N 9 273 - -
Seca10g02796 332 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 316 - -
Seca10g02796 332 Pfam Nucleotidyl transferase 9 217 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02796 Seca-Chr10 36379411 36384803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02796 K00966 - gmx:100782402 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02796 10 36379411 36384803 Seca10g02796 10 36379411 36384803 ECH