Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02791 ATGTTTCTTTCTAGATCATTGCCTTTTGTGGTTGTCTTTTTAGTGTTTCTCTCTCCAGCTCCAGCCAATGCTATTCGATCTCTTCCCAACAAGATCACAAGCAATAAAGTTGGTTCTTTTCTGCAATTCAGAGAGGCCCCAGAATACAGAAACCAGCAGAGATGCACTGAAATTGACAGAAACAATGAGCAATTGGTATGTGACCCATCACTTGTTCATATTGCCATGACCATTGACTGGGACTACTTAAGAGGATCTATAGCTGCAGTCCATTCTGTTCTCAAACACACTTCCTGTCCTCAGAATCTGTTCTTTCATTTCATTGCATCAGATGCAAGATTGGAGAGCAAGGATGAGTTTGATAGGATTGTTCAGAGTTCCTTTCCTTCCCTGAAGTTCAAAGTTTATGTGTTCAGGAAAAGTCTAGTGGAGAATCTCATATCTCCTTCAATAAGGCAAGCACTTGAGAACCCCTTGAACTATGCAAGAAGTTACCTCGCTGATTTGCTTGAGCAATGTGTTGAAAGAGTTATCTATTTGGATTCTGATGTCATAGTTGTTGATGATATTCAAGAGCTATGGAAGGTTTCACTGACTGGGTCAAGAGTTATTGGTGCTCCAGAGTATTGTCATGCAAACTTCACCAGATATTTTTCCTATGAATTTTGGTCCAGTTCTGAGTTCTCTGAGGCATTTGCAGGGAGAAAAAGACCTTGTTATTTCAACACTGGGGTGATGGTAATGGACTTGGTAAGATGGAGAGAGGGTGACTACACAAGGAAGATTGAGAAATGGATGGAAATTCAGAAGGATAGAAGGATTTATAAGTTGGGTTCACTTCCTCCTTTCTTGATGGTTTTTGGGGGAGATGTTGAGGCTATTGAACACAGATGGAACCAACATGGGCTTGGAGGGGATAATGTTGTCAATAGTTGCAGGACTTTGCATCCTGGTCCTGTCAGTTTGCTGCATTGGAGTGGTAAAGGGAAGCCATGGGCAAGGCTTGATGCCAGGATGCCTTGCTCAGCTGATTATCTTTGGGCACCTTATGATCTCTACATACCCCATGACCATACACATCACCACCACCACAGGAGAACTGCAACAGATTCATCATTGTAG 1122 0.4225 MFLSRSLPFVVVFLVFLSPAPANAIRSLPNKITSNKVGSFLQFREAPEYRNQQRCTEIDRNNEQLVCDPSLVHIAMTIDWDYLRGSIAAVHSVLKHTSCPQNLFFHFIASDARLESKDEFDRIVQSSFPSLKFKVYVFRKSLVENLISPSIRQALENPLNYARSYLADLLEQCVERVIYLDSDVIVVDDIQELWKVSLTGSRVIGAPEYCHANFTRYFSYEFWSSSEFSEAFAGRKRPCYFNTGVMVMDLVRWREGDYTRKIEKWMEIQKDRRIYKLGSLPPFLMVFGGDVEAIEHRWNQHGLGGDNVVNSCRTLHPGPVSLLHWSGKGKPWARLDARMPCSADYLWAPYDLYIPHDHTHHHHHRRTATDSSL. 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02791 373 Pfam Glycosyl transferase family 8 73 334 IPR002495 GO:0016757
Seca10g02791 373 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 73 347 IPR029044 -
Seca10g02791 373 SUPERFAMILY Nucleotide-diphospho-sugar transferases 72 354 IPR029044 -
Seca10g02791 373 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 357 - -
Seca10g02791 373 FunFam Hexosyltransferase 73 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02791 Seca-Chr10 36151168 36152289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02791 11 373 Glycosyltransferase AT1G70090 62.973 7.75e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02791 - - gmx:100780084 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02791 10 36151168 36152289 Seca10g02791 10 36151168 36152289 ECH