Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02746 ATGGAATTCTTCCAAAAAGCCAAAGTAGTGCGCCTGAGGAGCCACCATGACAAATACATGTTGGCAGATAATGATAAAGAAAACGTGTATCAAGACCGCAATGGGTGTTACAATAATGCTAAATGGACCGTGGAGATTTTGGAGAGTGGCAATGTCATAAGGTTGAGGAGTTGTTATGGAAAATATTTGACAGCCTCCAATATGCCATTTTTGTTGAGGGGAACGGGCAAGAAAGTGTTGCAAACTCTGCCAAGAAGGTTAGATTCATCTGTGGAATGGGAACCTTTGAGAGAAGGGGTTCAGGTGAGGTTAAGGACACGTTATGGCCAATATCTGCGTGGTAATGGAGGCTTACCACCTTGGAGGAACACCATCACCCATGATGTCCCACATAGGACTGCAACAGCTAATTGGGTTTTGTGGGATGTGGACATTGTGGAGCTTCGCCCACAACCAATAGCTCCTAAACCAAGACCAAGGCCCTTGCCTATTACACCACCAAATCGTTCTATGAATCCAACCCCAACTAGTCTTTCTCCTTCTTCTTGCCCTTCTCCATCACTTTCAGATTCAGATAATGCCCTTGTCAAGATTGATCTCAGGTCTCCCACAACATCCGAGCCTGAAGATTCAGATGATTGCCGGTCACCAATGAAAGAGGGGAGGATTATATTTTATGATGTAGGTAATGAAAATGGTGTGGTTGATGATGCAAAGAAAGGGGCATTCTTTACCTTTAAAGGAAGTTGTGTGATTGAGTTGAAGGATAAGTTGAAGGATGAAACAGGGCTTGATGATATTCTTGTGTGTTGCCGCAATCCATTGAATGCAAAACTTTATCCCCTTCGTTTACACCTACCTCCTAAAAATAGTGACATGCATGTTGTTGTGGTTCCTTCCTCATTTAATGGCCGATGA 918 0.4346 MEFFQKAKVVRLRSHHDKYMLADNDKENVYQDRNGCYNNAKWTVEILESGNVIRLRSCYGKYLTASNMPFLLRGTGKKVLQTLPRRLDSSVEWEPLREGVQVRLRTRYGQYLRGNGGLPPWRNTITHDVPHRTATANWVLWDVDIVELRPQPIAPKPRPRPLPITPPNRSMNPTPTSLSPSSCPSPSLSDSDNALVKIDLRSPTTSEPEDSDDCRSPMKEGRIIFYDVGNENGVVDDAKKGAFFTFKGSCVIELKDKLKDETGLDDILVCCRNPLNAKLYPLRLHLPPKNSDMHVVVVPSSFNGR. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02746 305 SUPERFAMILY Actin-crosslinking proteins 5 145 IPR008999 -
Seca10g02746 305 MobiDBLite consensus disorder prediction 151 191 - -
Seca10g02746 305 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Seca10g02746 305 MobiDBLite consensus disorder prediction 171 191 - -
Seca10g02746 305 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 301 - -
Seca10g02746 305 MobiDBLite consensus disorder prediction 152 170 - -
Seca10g02746 305 FunFam BnaC05g19630D protein 5 144 - -
Seca10g02746 305 Gene3D - 9 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02746 Seca-Chr10 35420246 35423311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02746 - - gmx:100775673 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02746 10 35420246 35423311 Seca10g02746 10 35420246 35423311 ECH
Seca10g02746 10 35420246 35423311 Seca10g02746 10 35420246 35423311 PCT