Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02701 ATGATAATGGGTCCTCCTAAAGGATTTTGGGACCAAAAGATGGATCTCTTTTCTGGGTATATTTGGGTTTTCCTCTCAAAGCTTGTGCAAACTCTGTTCTGGGTTTTCACCAAAATCTTCATTAGATACTGCAGTCATGAAACAATCAATTCAGCTTGTTCTTCAAACCTATGCCATGAAAACTATCCAACTGACTCTAATAATTCTGAGACAAAAACTGAGGCTGGGGTAGGTTGTTCTGAATCTCCTGAAGACAATACAAGTACTATTCAACAAGAATATGGTGAAAATGATTCTAATGGTTGTGAACCAAAAGCAGAGTCCAAGGAGGATTGTTCTGAAACTGTTAACTATGCTGGAAATCTTGGCCTTGAAGAAGAGGAAACAACCAAGCTGGTTTTCAAATTCCAATATCAAACTTGGAACAGAAGTGAAGAATTCAAGGAAGGTAGCAGTGGAAGTTTTGATTTTGTGAACACTGATAGTGGTAAGGCTTCTGCAACTGCAAGCACCAACAAGTATGAATTCATCTCAGGCATGAGTTTCAGCCACTTCATGGAAGAACAAGAAGCTTCAAATTTTACTGTCAAAGAACATTATGTTCATTCAAAAGATTCTCCTTTGCAAAGTGATTCAGTTAATGATTCTGATTTCCTGTCTGAAAGAATCAGTAAATCAGAAAATTGTGAAAGATGTGTTGATGCAGCAGAGAAGCTCAAGACTGTGCCTTATATAGAACAACAACCTGAAGAAAATCAAGTAGAGAATCTGCATGACAACAGGTTTGATGAAGAGATTGCAGCTGCAGATAATTTCCTTTCTGATGATGATTTCATTTGTACAAGCTCTGAATTAGATTCTATCAGTTCTATAGGAGATGGGTTTTTGTCAGATGTAGACTTTGGAACCACTATAGAACTTGACACTTTGGAAAACCATGATGAAGAAAATGAAGGGTTGACAGGAGAAGATTTGGAGAATTCAGATATGGAGAAGTTGAAAGCCAAAGGTCATTATTTTCAAGATAGGCATACCATCAATTCCAAGCCTGAAGAATCTGTGAAATCCTGTTCACATAGTTCAGCAAGTTTGGACCTTGATGATTCCCACAAGTTTGATGCACAGTGGGAACATCAAGATTTAATAGAACAGCTTAAGATGGAGCTGAACAAGGTCAGGGCCACTGGTCTGCCTACCATCCTTGAGAATTCTGAGTCCCTAAGGATAATGGAAGACTTGAAGCCATGGAAAATTGATGAAAAATTTCAGCATGGTAGTACTATAAATGAGCTTCCAAAATTCTACAAGAGTTATAGAGAACGGATGCGAAAATTTGATATCTTAAATTACCAGAAGCTGTATGCTTTAGTTTCATGGCAAATTATAGGTTCCCTGGAGTCAAAGGACCTGCTGCAAACGTTTTCAAGCCTTAAGAACTCTTCTCCAGCTATTACATCCTTTGTTCAACATATCTTTCACCTTAATAGGCATAAAAACTCTGGATCTGACCCAATGAAGAAGTTCATAAGGGAATTTTATAGTGACTTGGAAATGGTTTATGTGGGACAGTTGTGCCTTTCTTGGGAATTCCTTCAGTGGGAGTATGAAAGGGCCTTGGAGTTATGGGAATCTGATCACTACAGATTGCAAAGGTACAATGAAGTAGCAGGGGAATTCCAACAATTTCAAGTGCTGTTGCAAAGATTTATAGAGAATGAACCTTTCCAAGGTCCACGGGTTGAAAACTATGTCAGGAATCGTTGTGCTATGCGCAATCTTCTTCAAGTTCCAGTTATAAGAGAGGACAACACTAAGGAAGAAAAGAAATTGAGAACAAGTAATGCAGATAAAGATGCCATCACAAGTGATATGCTTGTAGAAATTTTGGAAGAATCAATCAGAACAATTTGGCGTTTCATTAGAGCTGATAAATATGCATCTAGCTTGATCCATAAAGGTCCAAGAGAAACTCAATTAGATCTCCAAGATCCTGCAGATTCAGAACTAGTGGAGATTCAAGCAGAACTTCAGAAGAAGGAAAAGAGACTTGGTGAATTTTTGAAGAGCAGAAGTAGCATATTGAAGAAGTTCCAAAAGCATGAGGAGGATGGGAGGGATAATTTCCTTTACTTTTTTTCTCAAGTGGATATGAAGTTGATTTGGAGAGTGTTGAACATGTCAAGAATAACCAGGGATCAAGTAGCATGGTGTGGTAATAAACTAAACAAAATCAATTTTGTAAACAGAAGGATACATATAGAACCATCGTTCTTATTATTTCCTTGTTAA 2289 0.3766 MIMGPPKGFWDQKMDLFSGYIWVFLSKLVQTLFWVFTKIFIRYCSHETINSACSSNLCHENYPTDSNNSETKTEAGVGCSESPEDNTSTIQQEYGENDSNGCEPKAESKEDCSETVNYAGNLGLEEEETTKLVFKFQYQTWNRSEEFKEGSSGSFDFVNTDSGKASATASTNKYEFISGMSFSHFMEEQEASNFTVKEHYVHSKDSPLQSDSVNDSDFLSERISKSENCERCVDAAEKLKTVPYIEQQPEENQVENLHDNRFDEEIAAADNFLSDDDFICTSSELDSISSIGDGFLSDVDFGTTIELDTLENHDEENEGLTGEDLENSDMEKLKAKGHYFQDRHTINSKPEESVKSCSHSSASLDLDDSHKFDAQWEHQDLIEQLKMELNKVRATGLPTILENSESLRIMEDLKPWKIDEKFQHGSTINELPKFYKSYRERMRKFDILNYQKLYALVSWQIIGSLESKDLLQTFSSLKNSSPAITSFVQHIFHLNRHKNSGSDPMKKFIREFYSDLEMVYVGQLCLSWEFLQWEYERALELWESDHYRLQRYNEVAGEFQQFQVLLQRFIENEPFQGPRVENYVRNRCAMRNLLQVPVIREDNTKEEKKLRTSNADKDAITSDMLVEILEESIRTIWRFIRADKYASSLIHKGPRETQLDLQDPADSELVEIQAELQKKEKRLGEFLKSRSSILKKFQKHEEDGRDNFLYFFSQVDMKLIWRVLNMSRITRDQVAWCGNKLNKINFVNRRIHIEPSFLLFPC. 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02701 762 MobiDBLite consensus disorder prediction 64 98 - -
Seca10g02701 762 Coils Coil 669 689 - -
Seca10g02701 762 PANTHER OS09G0413600 PROTEIN 12 762 - -
Seca10g02701 762 MobiDBLite consensus disorder prediction 64 108 - -
Seca10g02701 762 Pfam Protein of unknown function (DUF1666) 514 761 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02701 Seca-Chr10 34582911 34586950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02701 - - gsj:114399011 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02701 10 34582911 34586950 Seca10g02701 10 34582911 34586950 ECH
Seca2g00631 2 9471043 9476149 Seca10g02701 10 34582911 34586950 PCT