Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02521 ATGATGAGAATGACACAAATGATTATCTTTCTCTCATTTGTTTTCTCTCTGCTTCTATCTCCCTCCCATACCCTTACCCTTGCACCAGCATTGTACGTCTTTGGTGACTCCCTCTTGGACAGTGGTAACAACAATCTGCTGCCAACCGTCGCCAGAGCAAATTTCTTGCCTTATGGTCTTGATTCAACTAAAGGCCCCACCGGAAGATTCACAAATGGAAGAACTGTTGCCGATTTTATTGCTGAATATCTTGGATTGCCATATTCTCCACCATACATGAGTCTTGAAGTTCCAAAGTCGTTAACTGGAATCAATTATGCATCTGGTTCATGTGGAATTCTGCCAGAGTCTGGAAACATACTTGGGAAATGCCTTAATTTGAGGGAACAGATTAACTTATTTGAAAGGACAGTTAAGAGGGATTTGCCTAGGAAGCTCAAAAACTCAACTCTGTTATCTGAGCATTTATCAAAATCCATATACATATTCTCTGTAGGTAGCAATGATTACATTAATAACTACCTTGAAACCAAGTTTTATGATACAAGCAAGCGCTACCTGCCTCAGCCTTTTGCTCAGCTTCTCATTCACAACCTTTCCCACCAACTTGAGAGATTGTACAACTTGGGAGCCAGGAAGGTAGTGATGTTTGAAATTGGACCCATAGGGTGCATCCCAGCAATCTCAAGAACACATGCACACAAAGGTGATTGCATGGAGGAAACAAACCAAATAGTGTCATACTTCAACAAAAGGCTCACTCCAATGCTTCAAAATCTAACATCCAGTCTTCCAGGCTCCATCTTTGTTCTTGGTCGAGCCAACTCTCTAGGATATGATATAATCAAAAATCCATCCAATTATGGTCTAAGAGATGGAAGCAATCCATGTTGCATCACATGGGGAAATGGGACTTCAGGATGTATCCCTTTATCAAAAGCATGCCAGAACTCAAACAAGCATGTATTTTGGGATGGTTATCATCTTACAGAAGCAGTGTATTCAGTCATGGCATCTAGATGTCTCACTGATACATCTGTATGCACACCACTGAGCATTGAAGGGCTGGTCAAAATTAATTAA 1083 0.409 MMRMTQMIIFLSFVFSLLLSPSHTLTLAPALYVFGDSLLDSGNNNLLPTVARANFLPYGLDSTKGPTGRFTNGRTVADFIAEYLGLPYSPPYMSLEVPKSLTGINYASGSCGILPESGNILGKCLNLREQINLFERTVKRDLPRKLKNSTLLSEHLSKSIYIFSVGSNDYINNYLETKFYDTSKRYLPQPFAQLLIHNLSHQLERLYNLGARKVVMFEIGPIGCIPAISRTHAHKGDCMEETNQIVSYFNKRLTPMLQNLTSSLPGSIFVLGRANSLGYDIIKNPSNYGLRDGSNPCCITWGNGTSGCIPLSKACQNSNKHVFWDGYHLTEAVYSVMASRCLTDTSVCTPLSIEGLVKIN. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02521 360 CDD SGNH_plant_lipase_like 29 344 IPR035669 -
Seca10g02521 360 Pfam GDSL-like Lipase/Acylhydrolase 31 339 IPR001087 GO:0016788
Seca10g02521 360 Gene3D SGNH hydrolase 26 346 IPR036514 -
Seca10g02521 360 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 16 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02521 Seca-Chr10 31336173 31338518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02521 24 357 Acyl Lipid Metabolism Gene Families AT4G10950 35.088 2.67e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02521 - - gmx:100777774 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02521 10 31336173 31338518 Seca10g02521 10 31336173 31338518 ECH