Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02339 ATGGCGAAAGTTTGGATTTTGTGGCTGCTAGTGATTGTGGGTGTGGTGGGCATTGCCACTACTGATGCGGCAAGAAAGGCACCATGGAGGATCCACACCCTGTTCTCTGTGGAATGTCAGAACTACTTCGATTGGCAGACGGTGGGGCTCATGAACAGCTACAGAAAGGCAAAGCAACCCGGACCTATCACACGTCTCCTCAGTTGCACTGATGAGGAGAAGAAGAATTACAAAGGGATGCATTTGGCACCAACATTTGAGGTGCCCTCAATGAGCAAACACCCCAGAACTGGTGACTGGTACCCTGCTATAAACAAACCTGCTGGGGTTGTACACTGGCTTAAACATAGTAAGGATGCAAAAAATGTTGACTGGGTTGTCATTCTAGATGCAGACATGATTATCCGAGGCCCAATTTTACCTTGGGAACTTGGTGCAGAGAAAGGAAGACCAGTTGCAGCATATTATGGGTACTTAATAGGTTGTGACAATATTTTGGCTCAACTGCATACAAAACACCCAGAACTGTGTGACAAAGTTGGTGGGCTTTTGGCCTTTCATATAGATGACCTGCGAGCTTTTGCCCCCTTATGGCTTTCAAAAACAGAAGAAGTACGGGAAGATAGGGCTCACTGGGCAACAAACATAACTGGTGACATCTATGGGAAAGGATGGATCAGTGAGATGTATGGATACTCTTTTGGTGCTGCAGAAATTGGACTTCGGCACAAGATCAATGATAACTTGATGATATACCCAGGTTATATTCCTCGAGAGGGAATTGAGCCTATTCTTCTTCACTATGGGCTGCCATTCAGTGTAGGGAATTGGTCATTTAATAAACTGGCTCACCATGATGATGGAATCGTTTATGAATGTGGCCAGCTCTTTCCAGAACCTCCTTATCCCAAGGAGGTAAGACAGATGGAACTTGACCCTAATCGAAGGCGAGGACTATTTATAAGTATAGAGTGCATAAACATTATAAATGAAGGTCTTTTATTACAACATGCAGCAAATGGTTGCCCCAAACCAGTGTGGTCTAAATACTTGAGCTTTTTGAAAAGCAAAGCTTTTGCTGAACTAACTAAGCCAAAATATGTGACTCCTGCTACTTTACAAATGATGGAGGATAAGCATACTGAAGAAGAACATGTTGATCATGATGCTGGAAAGCCATATCCCAAAATCCATACGGTTTTTTCTACAGAATGCACCACTTACTTTGATTGGCAGACTGTAGGTCTTATGCACAGTTTCCGTATGAGTGGACAGCCTGGAAATATCACTAGACTTCTCAGCTGCTCTGACGAGGACTTGAGGCAGTATAAGGGTCATGATCTGGCTCCCACACATTATGTCCCTTCTATGAGTCGACATCCAATAACAGGAGATTGGTATCCAGCAATTAATAAACCAGCTGCAGTCCTTCACTGGCTTAATCATGTAAATATTGATGCTGAATTCATAGTGATTCTTGATGCTGATATGATCTTGAGAGGCCCAATCACACCATGGGAATTCAAAGCTGCTCGTGGCCATCCTGTTTCAACTCCTTATGACTACCTTATTGGCTGTGACAATGAACTTGCAAAATTACATACTAGCCATCCTGAGGCTTGCGACAAGGTTGGTGGTGTAATCATAATGCATATAGATGATCTCCGGAAATTTGCTTTGCTATGGCTGCATAAAACCGAGGAGGTCCGAGCTGATAGAGCTCATTATGCAAAAAATATAACAGGAGACATATATGAATCTGGGTGGATTAGTGAGATGTATGGTTACTCATTCGGTGCAGCAGAGTTGAAATTGAGGCATACTATAAACAATGAGATACTGATATACCCTGGATATTTTCCTGTCCCGGGTGTCAAGTATAGAGTTTTTCATTACGGATTGCGATTCAGTGTTGGGAATTGGAGCTTTGACAAAGCAGACTGGCGGGAGGTTGACATGGTCAACAGATGCTGGGCCAAGTTCCCAGACCCACCAGATCCCTCCACTCTTGATCAAGATAATGAGCCAAATTTACAGCGAGATCTACTCAGTATAGAATGTGCGAAGACAATGAATGAAGCACTGAATCTGCATCACAAGAAAAGGTGCCTCAGTACTAATTCCTCATTGACATCAAAAGGGGAAGAGAGAACAGAGGAAAGTGGAATGTCAAGGGAATTGGGCAGTGTAGATGCAAGTATTGATTCAACAAACAATCATATGTCAACAAATCATACTGAGGAATTGGTTGCAAGGGTTAAGAAAGATGAGATGCCTAGTTCTTTCAGGTTCTGGATGATATTCTTATGGGCATTTTCTGGAGTAGGTTTTTTGGTTGTCATTTTTGTGGTGTATTCAGGTCATAAAAGAAGAGGAACAAGGACGAAACACCATAGAAGGAGACGAAGCTTGCATCCAGGATACATGGAAATGAATGGACGTGACCGCCGTGGTGTTGATGTACCTCTGTAA 2472 0.43 MAKVWILWLLVIVGVVGIATTDAARKAPWRIHTLFSVECQNYFDWQTVGLMNSYRKAKQPGPITRLLSCTDEEKKNYKGMHLAPTFEVPSMSKHPRTGDWYPAINKPAGVVHWLKHSKDAKNVDWVVILDADMIIRGPILPWELGAEKGRPVAAYYGYLIGCDNILAQLHTKHPELCDKVGGLLAFHIDDLRAFAPLWLSKTEEVREDRAHWATNITGDIYGKGWISEMYGYSFGAAEIGLRHKINDNLMIYPGYIPREGIEPILLHYGLPFSVGNWSFNKLAHHDDGIVYECGQLFPEPPYPKEVRQMELDPNRRRGLFISIECINIINEGLLLQHAANGCPKPVWSKYLSFLKSKAFAELTKPKYVTPATLQMMEDKHTEEEHVDHDAGKPYPKIHTVFSTECTTYFDWQTVGLMHSFRMSGQPGNITRLLSCSDEDLRQYKGHDLAPTHYVPSMSRHPITGDWYPAINKPAAVLHWLNHVNIDAEFIVILDADMILRGPITPWEFKAARGHPVSTPYDYLIGCDNELAKLHTSHPEACDKVGGVIIMHIDDLRKFALLWLHKTEEVRADRAHYAKNITGDIYESGWISEMYGYSFGAAELKLRHTINNEILIYPGYFPVPGVKYRVFHYGLRFSVGNWSFDKADWREVDMVNRCWAKFPDPPDPSTLDQDNEPNLQRDLLSIECAKTMNEALNLHHKKRCLSTNSSLTSKGEERTEESGMSRELGSVDASIDSTNNHMSTNHTEELVARVKKDEMPSSFRFWMIFLWAFSGVGFLVVIFVVYSGHKRRGTRTKHHRRRRSLHPGYMEMNGRDRRGVDVPL. 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02339 823 PANTHER PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE 4 386 IPR044845 GO:0016757
Seca10g02339 823 MobiDBLite consensus disorder prediction 708 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02339 Seca-Chr10 27991947 28000657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02339 K20781 - gmx:100776740 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02339 10 27991947 28000657 Seca10g02339 10 27991947 28000657 ECH