Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02231 ATGGGAAGCGACATATTTGATGGGAAGACATTGACAGAGAAGTTGTTGAAACTCAACAATTCTCAACAAAGCATTGAATCATTATCCCGGTTGTGTATTTCTCACCGGACAAGAGCAAAAGAAATAGTTGAAACATGGGACAAATTGTTCAGCTCTTCCCAGAAAGAGAAGCGCATCTCTTTTCTATACTTGGCTAATGACATCTTGCAAAATAGTAGGCGAAAGGGCAGTGAATTCGTTAATGAATTCTGGAAAATTCTTCCAGCAGCTCTCAGGCGTGTTTATGAAAGTGACGAGCAAGGAAAGAAAGTAGTAACCAGACTTTTTGACATATGGGAGGAGAGGAAGGTTTTTGGTTCTCGGGGTCAGGGTCTTAAGGATGAAATAATGGGTAAGAACTTATCAAGCAATGGAAAGAGTTCAAATCCTATCAAGATATTGAAGAGGGATGCCCACTCATTGAGATTGAAATTGGCTATTGGGTGTTTGCCAGAAAAAATACTAACAGCATTGCATAGGATTCATGATGAACATCTTAATGAGGAAGCTGCCTTAAGCAAGTGTAATACAGCTGTACGCCAAATGGGTATACTAGTAGAAGATGTTGAAAATACATTGGCTCAAGGAAATCAGCTGGGATCCACATTGGTAAATGACCTGCAAGAGCAGGAAAAGGAGCTTAAGCAGTACATGGTGCAACTTGAAAATGCTGAGGCTGCCAGGGCTACTTTGCTTTCCCAGCTTAAAGACGCACTGCAGGAACAGGAATCAAGGCAAGAGCTTGTTCACACTCAGTTGCTAGCTGCACGAGACCAGATTGAGCAAGCAGCCAGTATCAGGAAGAGGCTTAACCAAGCACCCGAAGCCCTGAGGGTGTTGGAACAAAATCTTCCACCGGTTCAACTAAACAGCACCCATCCTCAGCCTTCTTTTACCCAGCCTTCTATATCATTTGCTCCTCTCCAAACTACTGAAGAAGATAAGAAGGCAGCAGCAGCTGCTGTTGCTGCTAAGCTTGCTGCCTCTACATCCTCCGCCCTCATGCTTACATCTGTTCTTTCTTCCCTAGTTGCCGAAGAAGCTGCCTCTAAGAATGGTAGCTTAAATCCTACTGGTTTTGCTTCAGGATTACCTGTTTTCAATCCAGAGAAAAGACTCAAACTTGACAAGCAAATGTCTGTTTCTGATGTTAACAGTTCTGATACAGGGAGCTCTTCTTTTTTCACCACTTTACAACAACCATCGGTGGCAAATGTGCCACTGACACCAACCAGCTTGCAACCTATATCTCAACCCAATCAATTACAAGCTGCGTTTGTTTCAGCACCCCTACCCCCTCATTCACCGGTGAATCCCCCTGCAAATCAGTATGTTCAATCTGCTGGATTGATGGTTGGGGGAATTCCTTATGGATATGGATCAAACAGCCTACCACCACCTCCACCTCCTTTGCCTCAACATGTGGCAATAGGATTATCGAGGCCCAGCACCCAGCCATCACAGTCACAGCAATCACAGGCTCAGCAAGCACAGCAGCAACAGCAGTCAGCCACCGGAGGATTTTACAGGCCACCAGGAATGGGGTTTTATGGGCAGAGCCATCCATCAACACCACCAGCGCCAGTACCTAGGCAGTGA 1638 0.4512 MGSDIFDGKTLTEKLLKLNNSQQSIESLSRLCISHRTRAKEIVETWDKLFSSSQKEKRISFLYLANDILQNSRRKGSEFVNEFWKILPAALRRVYESDEQGKKVVTRLFDIWEERKVFGSRGQGLKDEIMGKNLSSNGKSSNPIKILKRDAHSLRLKLAIGCLPEKILTALHRIHDEHLNEEAALSKCNTAVRQMGILVEDVENTLAQGNQLGSTLVNDLQEQEKELKQYMVQLENAEAARATLLSQLKDALQEQESRQELVHTQLLAARDQIEQAASIRKRLNQAPEALRVLEQNLPPVQLNSTHPQPSFTQPSISFAPLQTTEEDKKAAAAAVAAKLAASTSSALMLTSVLSSLVAEEAASKNGSLNPTGFASGLPVFNPEKRLKLDKQMSVSDVNSSDTGSSSFFTTLQQPSVANVPLTPTSLQPISQPNQLQAAFVSAPLPPHSPVNPPANQYVQSAGLMVGGIPYGYGSNSLPPPPPPLPQHVAIGLSRPSTQPSQSQQSQAQQAQQQQQSATGGFYRPPGMGFYGQSHPSTPPAPVPRQ. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02231 545 Coils Coil 266 286 - -
Seca10g02231 545 SMART 558neu5 10 130 IPR006569 -
Seca10g02231 545 ProSiteProfiles CID domain profile. 3 134 IPR006569 -
Seca10g02231 545 Pfam CID domain 10 120 IPR006569 -
Seca10g02231 545 CDD CID_RPRD_like 10 130 - -
Seca10g02231 545 SUPERFAMILY ENTH/VHS domain 16 117 IPR008942 -
Seca10g02231 545 MobiDBLite consensus disorder prediction 474 545 - -
Seca10g02231 545 Gene3D - 4 130 IPR008942 -
Seca10g02231 545 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 7 539 - -
Seca10g02231 545 MobiDBLite consensus disorder prediction 491 520 - -
Seca10g02231 545 FunFam ENTH/VHS family protein isoform 1 3 130 - -
Seca10g02231 545 Coils Coil 217 254 - -
Seca10g02231 545 MobiDBLite consensus disorder prediction 474 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02231 Seca-Chr10 25858691 25885918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02231 K15559 - gmx:100791478 781.941