Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02226 ATGGCTGAGAGAACCGTGTCTTCCCTCAAAGCTATTGTTTCTAGAAACTCATTGTTTTTCTTCTTCACAATGACATCTTTTCTGTTTCTCATGTCATGGTTCTTTGTTTTGCGTTCCACGGATCGTCCTCATTTCATTGACCACAACTTGTTGCCTAATTCAAAGCTTTTCTCTTTCAATAATGATGGCACAAAGTCTCAGATGCAGAACCAAAATGTTGAGTCCTCATTTGGGAACAGAGCAATTCTTGTGGATAGTGAAGATGTAGAAGAGGAGAATGGGAAGAAAAAAAACCCTAAAAAATTTGATGGTGGGAATTGCATGAAAAATGATAAAGATGTTGTGAAGGTTTTCATGTATGATTTGCCATCAGAGTTCCATTTTGGACTCTTGAATTGGAAAGCTAGTGGGAATAGTGTTTGGCCTGATATTAGAACTGCAATACCTGGTTACCCTGGAGGTTTGAATTTGCAACATAGTATAGAGTTTTGGCTTACATTAGATATTCTTGCTTCAGAATTTCCTAATTCTTCCAAGGCTAGAACTGTAATTAGAGTTAGAAACTCAAGTGAAGCTGATGTTATATTTGTGCCATTCTTTTCTTCTTTGAGCTTTAACAGATACTCAAAAACTAATCCACATGAGAAGAAGACTAGGAACATGATACTACAAGAGAAGTTAGTGAAGTATTTGACAAGTCAAGAGGAATGGAAGAGGTCAGGGGGAAAGGATCATTTGATTTTAGCTCACCATCCTAATAGTATGCTGGATGCAAGAATGAAGTTGTGGCCTGCTACATTCATACTTTCTGACTTTGGGAGATATCCTCCAAGCATAGCCAATGTTGAAAAGGATGTGATTGCACCTTATAAACATTTAATCAGTTCTTATGTCAATGATGTCTCCACCTTTGATAGCCGTCAAACATTGCTGTACTTCCAAGGAGCAATATATAGAAAAGATGGAGGTTTAGCTCGGCAAGAGCTATATTATCTTTTAAAAAATGAAAAAGATGTACATTTTTCATTTGGAAGCATTCACAATGATGGAATCAAGAAAGCTACTGAAGGCATGCGTTCTTCCAAATTCTGCCTCAACATAGCTGGTGACACCCCTTCATCAAACCGTTTATTTGATGCCATTGCTAGTCACTGTGTCCCTGTCATAATCAGTGATGAAATTGAGCTTCCATTTGAAGATGTCCTTGACTACTCTGAGTTCTGTGTATTTGTTCGTACCATTGATGCTATCAAAGAAAATTTTCTAATCAATTTCATCAGAAGTATAGGCAAAGATGAGTGGACACAAATGTGGAACAAGTTGAAAGAAGTTGAACATTTTTTTGAGTATCATTTCCCAGCTAAGGAGGGTGATGCTGTCCAAATGATTTGGCAAGCTGTTGCACGTAAGGTTCCTGCTATGAAATTGAAGCTTAATAGATCTAAGAGGTACTCTAGGTCCCCTCCAATTACAGAGAAAGGGCTAAAATCAATACCTGTACCAAGAAATTTTTGGTGA 1518 0.3755 MAERTVSSLKAIVSRNSLFFFFTMTSFLFLMSWFFVLRSTDRPHFIDHNLLPNSKLFSFNNDGTKSQMQNQNVESSFGNRAILVDSEDVEEENGKKKNPKKFDGGNCMKNDKDVVKVFMYDLPSEFHFGLLNWKASGNSVWPDIRTAIPGYPGGLNLQHSIEFWLTLDILASEFPNSSKARTVIRVRNSSEADVIFVPFFSSLSFNRYSKTNPHEKKTRNMILQEKLVKYLTSQEEWKRSGGKDHLILAHHPNSMLDARMKLWPATFILSDFGRYPPSIANVEKDVIAPYKHLISSYVNDVSTFDSRQTLLYFQGAIYRKDGGLARQELYYLLKNEKDVHFSFGSIHNDGIKKATEGMRSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPFEDVLDYSEFCVFVRTIDAIKENFLINFIRSIGKDEWTQMWNKLKEVEHFFEYHFPAKEGDAVQMIWQAVARKVPAMKLKLNRSKRYSRSPPITEKGLKSIPVPRNFW. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02226 505 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 23 464 IPR004263 GO:0006486|GO:0016757
Seca10g02226 505 Pfam Exostosin family 113 416 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02226 Seca-Chr10 25809684 25813471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02226 - - gmx:100811377 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02226 10 25809684 25813471 Seca10g02226 10 25809684 25813471 ECH