Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02212 ATGGGTATCAAAATTTTCATTGTTTCCTTCATGCTAACATCAATATTGTTGTTTCTTATTTACATTCCCACTAGACTAACCACACCCATCTCCAGTTTCAAGGCTCCAATGAACAACTACTTTAACATCTCCAAGACCAGCAAAGCATACCCAGTTACTTTTGCCTATTTGATCTCAGCTTCCAGAGGAGATTCTGGGAAGCTCAAAAGGTTGTTGAGGGCTCTATACCATCCAGGGAACTACTATTTGATCCATATGGATCATGGGGCTCCAGAGTCTGAGTATAAGGATGTGGTTGAATATGTGACCAGTGACTCTGTGTTTGGTCAAGTAGGGAATGTTTGGATTGTGGGGAAGCGTAATTTGGTCACCTACAGAGGACCAACCATGCTTTCCACCACTCTCCATGCTATGGCAATGCTTCTGAGAAGTTGCAAATGGGACTGGTTTATCAATCTTAGTGCATCTGATTATCCCTTAGTTACACAAGATGATCTGATCCAAGCCTTTTCCAAGATTCCAAGGGATATCAATTTTATTCACCATAGCAGTCAATTGGGTTGGAAACTGAACAAGAGAGGGAAGCCAATAATTATAGACCCAGGGCTTTATAGCCACAAAAAATCAGATATTTGGTGGGTCATTAAGCAGAGGAGTCTCCCAACAGCTTTTAAACTCTATACAGGTTCAGCTTGGACAATGCTATCAAGATCATTTGCTGAGTATTGCATTGTTGGGTGGGAAAATTTGCCAAGGACTCTCCTTCTGTACTACACTAACTTTGTGTCATCCCCAGAAGGGTATTTTCAAACGGTTATATGCAACTCAGGCTACAAGAACACCACAGCTAACAATGACTTACACTACATTTCTTGGGACAATCCACCAAAACAACACCCAAGGTCTCTAGGACTTAAAGATTACAGGAAAATGGTTCTGAGCAACCGTCCATTTGCCAGGAAATTTAAGAAAAACGATCCTGTTTTAGATAAAATTGATAGAGAGCTTTTGAAGAGGCATCGTGGGCACTTTTCTTTTGGAGGATGGTGCTCCCAAGGTGGAAGGAACAAAGCATGCCCCAGTTTGAAAACAAAGAATTTTGGTGTTCTCAACCCTGGCCCTGCCTCCAGAAAATTGAAGACTCTGCTCTCCAATATTCTCTCCCATAAAAATTTTCACAAACAACAATGCCGGTAA 1197 0.4144 MGIKIFIVSFMLTSILLFLIYIPTRLTTPISSFKAPMNNYFNISKTSKAYPVTFAYLISASRGDSGKLKRLLRALYHPGNYYLIHMDHGAPESEYKDVVEYVTSDSVFGQVGNVWIVGKRNLVTYRGPTMLSTTLHAMAMLLRSCKWDWFINLSASDYPLVTQDDLIQAFSKIPRDINFIHHSSQLGWKLNKRGKPIIIDPGLYSHKKSDIWWVIKQRSLPTAFKLYTGSAWTMLSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSGYKNTTANNDLHYISWDNPPKQHPRSLGLKDYRKMVLSNRPFARKFKKNDPVLDKIDRELLKRHRGHFSFGGWCSQGGRNKACPSLKTKNFGVLNPGPASRKLKTLLSNILSHKNFHKQQCR. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02212 398 Pfam Core-2/I-Branching enzyme 54 311 IPR003406 GO:0016020|GO:0016757
Seca10g02212 398 PANTHER GLYCOSYLTRANSFERASE 8 397 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02212 Seca-Chr10 25435163 25438733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02212 43 398 Glycosyltransferase AT4G27480 56.474 1.58e-148 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02212 - - gmx:100812712 671.003