Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02203 ATGCAAGTACAAAAAGCGAGCACACTGACAAATGATGAAACCAAGGCGAAAATCAGAAAACGAACGAAGCAAAGACCACTCAGAGAGCAGAGGAGAGCACTCTCTCTCTCTTTCCCCTTTCTTTCTTTCCTCCTAACTTGTTGGATACCTTGGCTTGTTAAGCCAAACAAAAAGACAGAGAGAGACAAATTTGTGATGGGGATTCGTGTTGATTCACGAGAGGGTGGTAAAAATGGAGGACAGTGTTCATGGAGGTTTTTAACTAGGAGGAAGAAGGTGGATTCTCCTTCTAAGAACAATAACTCCCATGGCCAACTCGCCAAGGAGTTAACTGTTCCTCATCTCATGGCAATTGGTGTTGGTGCAACAATTGGTGCTGGTGTGTATGTTCTGGTTGGAACAGTGGCTCGAGAGCATGCTGGACCAGCTTTGCCACTTTCATTTCTGGTGGCTGGATTAGCAGCTGCTCTTTCTGCTCTTTGCTATGCTGAGCTGGCTAGCCGCTGTCCTTCTGCTGGGAGTGCCTATCACTATTCATACATATGTGTTGGGGAAGGAGTTGCTTGGTTGATTGGTTGGGCCTTGATTCTGGAATATACAATTGGTGGAGCTGCTGTTGCTCGTGGCATAACCCCCAATATGGCTGCACTTATTGGAGGAGCGGACAATTTGCCAAGCTTTTTATCTTGTCAGCGTATTCCGGGAACTGATATTGTTATAGACCCATTTGCAGCAATTATGATATTTATTATTACTGGACTCCTCTGTACTGGGATCAAAGAGAGTACAAGGGTACAAAGTATAGTCACATCAGTCAACATATGTGCTTTGCTTTTTGTGATAGTAGCTGGTGGTTACTTGGGATTCAAATCTGGATGGGTTGGATATGAACTTCCTACAGGGTATTTTCCCTTTGGGGTAGATGGGATGCTTGCTGGTTCTTCCACAGTCTTTTTTGCATATATAGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTTAAAAATCCTCAACGAGATTTGCCACTTGGTATTGGTGCTTCTCTGTTTCTATGTTGTGGATTGTATATGATGGTCTCCATTGTTGTTGTTGGTTTAGTACCTTATTATGCTATCAATCCTGACACCCCCATATCCTCTGCATTCGCTGACAATGGAATGCAATGGGCAGCATACATTATAAATGCTGGGGCTTTAACAGCTCTATGTGCATCATTGATGGGTGGGATATTGCCCCAGCCAAGAATTTTGATGGCTATGGCAAGGGATGGGTTGCTGCCACCATTTTTTTCTGAAATTAATAAGCGCAGCCAGGTTCCTGTCAAGAGTACAATAGTTACAGGCATTGTTGCTGCAGTCTTGGCATTTTCCATGGATGTCTCTCAACTGGCTGGGATGGTTAGTGTGGGTACGCTTCTTGCATTCACCACAGTGGCAGTATCTGTGTTGATACTGAGATATATCCCACCAGATGAGGTTCCATTGCCCCCTTCTCTCCAAGAACCATTTGATTCAGTGTCACTGCAATATGGCCAGAGCTATTTAGGGACAAATGAAAAGGATACACAGGCAAATGTTGGTACTTGTGGGAACCAGGAACCCTTACTTGTTAAAGAAGATGTATCAGTTGATTATTCCCTTTTTGCTAAACATCTTGCCATAGGCAACTATGTACATGAGGGTAATAGGCGAAAATTTATTGGGTTGGTAATAGCTTTTACATGCTTTGGCGTGTTTGTCCTTACATATGCAGCTTCAGATACAACTCTTCTCAGTTCAATTCGCTTTGCACTATGTGGAGTTGGTGGCACTCTTCTTTTGTCTGGTTTTGTCTTCTTAGCCTGTATAGATCAAGATGATGCAAGGCACAACTTTGGGCACTCTGGAGGTTTCACTTGCCCACTTGTGCCTCTTCTGCCTATAGCTTGCATTCTCATCAATTGCTATTTACTTATCAATCTTGGGGCTGCTACATGGATGCGTGTTTCTATATGGCTAGCAATAGGAGTGATAGTTTATATATTTTATGGTCGAACCCATAGCGCTCTAAAAGATGCAGTTTATGTGCCAACAACTCAAGTGGATGATATCTATCATACCCCCCCAAGCTATCTTGCTTAA 2121 0.4342 MQVQKASTLTNDETKAKIRKRTKQRPLREQRRALSLSFPFLSFLLTCWIPWLVKPNKKTERDKFVMGIRVDSREGGKNGGQCSWRFLTRRKKVDSPSKNNNSHGQLAKELTVPHLMAIGVGATIGAGVYVLVGTVAREHAGPALPLSFLVAGLAAALSALCYAELASRCPSAGSAYHYSYICVGEGVAWLIGWALILEYTIGGAAVARGITPNMAALIGGADNLPSFLSCQRIPGTDIVIDPFAAIMIFIITGLLCTGIKESTRVQSIVTSVNICALLFVIVAGGYLGFKSGWVGYELPTGYFPFGVDGMLAGSSTVFFAYIGFDAVASTAEEVKNPQRDLPLGIGASLFLCCGLYMMVSIVVVGLVPYYAINPDTPISSAFADNGMQWAAYIINAGALTALCASLMGGILPQPRILMAMARDGLLPPFFSEINKRSQVPVKSTIVTGIVAAVLAFSMDVSQLAGMVSVGTLLAFTTVAVSVLILRYIPPDEVPLPPSLQEPFDSVSLQYGQSYLGTNEKDTQANVGTCGNQEPLLVKEDVSVDYSLFAKHLAIGNYVHEGNRRKFIGLVIAFTCFGVFVLTYAASDTTLLSSIRFALCGVGGTLLLSGFVFLACIDQDDARHNFGHSGGFTCPLVPLLPIACILINCYLLINLGAATWMRVSIWLAIGVIVYIFYGRTHSALKDAVYVPTTQVDDIYHTPPSYLA. 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02203 706 MobiDBLite consensus disorder prediction 1 26 - -
Seca10g02203 706 Pfam C-terminus of AA_permease 631 681 IPR029485 -
Seca10g02203 706 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 87 681 - -
Seca10g02203 706 Pfam Amino acid permease 115 492 IPR002293 GO:0016020|GO:0022857|GO:0055085
Seca10g02203 706 Gene3D Amino acid/polyamine transporter I 545 695 - -
Seca10g02203 706 Gene3D Amino acid/polyamine transporter I 106 503 - -
Seca10g02203 706 FunFam probable cationic amino acid transporter 106 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02203 Seca-Chr10 25289483 25298095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02203 85 706 Organic Solute Cotransporters AT5G36940 66.348 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02203 K13863 - gmx:100820395 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02203 10 25289483 25298095 Seca10g02203 10 25289483 25298095 ECH