Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02194 ATGAAGGAGGATATTGGTGGTGTCTCTGTGGAAATGGAGGGTGCAGGTTTGGTGGAGCAGGGTGGAGACAGAGTTGGACGTGTTGACAAGGTTGGTTATGTGAGAAAGGTCATTGTCAAGAAGAGGAAGCCTTATCGCCGGGTTAGAAAGCCAGTTCCTAAGGTCCCAAAGGTACTTCAGGAGCTATTTGTCTCATGCAAGGAAACATTCAAAGGCCCTGGCACTGTTCCTTCACAACAAGATGTTCAGAAACTGTGTCACATTCTAGATAACATGAAGCCAGAAGATGTTGGCCTAAGTAAAAATCTGCAGTTCTTCAAGCCTGAAAACATTGTCAAAGAGAATCCAAGGGTCACATACACAACCATATACAAGTGTGCTAATTTCTCTCTCTGCATATTTTTCCTACCTGCAAAGGGTGTCATTCCCCTCCATAACCACCCAGGAATGACAGTTTTCAGTAAGCTTCTACTAGGACAGATGCACATTAAGTCTTATGATTGGGTTAATCCTGAGGTCTCTCACAATTTGTTGCAGCAACCATCTCAGTGTATGTATTCAAAATTTCAAATCTCTATAAATATCACCAGATATTATGAACCTGAATTCATGGGACTAGAAATGCTAACAAGTAACAACACACTCTTTGTATTGATGAGGTTGGCAAAGTTAAAAGCTAATAATGTCTTCACAGCACCCTGTGATACTTCAGTGCTGTATCCAAAGACTGGAGGCAACATCCATGAATTCACAGCCATAACACCATGTGCTGTGCTTGATGTCATTGGCCCTCCTTATTCCAAAGATGATGGCAGAGATTGCTCCTACTACAGAGATCACCCTTATGCTGCTTTTCCCAATGCAGAGATTGCTGAGGTGAAAGAAGGAAATGATAATTACTCATGGTTGGAAGAAATTGAGATGCCAGAAAACTCTGAAATGGATGGAATTGAGTACTTGGGTCCTCCAATTATAGAGTCTGCCCTTTAG 990 0.4202 MKEDIGGVSVEMEGAGLVEQGGDRVGRVDKVGYVRKVIVKKRKPYRRVRKPVPKVPKVLQELFVSCKETFKGPGTVPSQQDVQKLCHILDNMKPEDVGLSKNLQFFKPENIVKENPRVTYTTIYKCANFSLCIFFLPAKGVIPLHNHPGMTVFSKLLLGQMHIKSYDWVNPEVSHNLLQQPSQCMYSKFQISINITRYYEPEFMGLEMLTSNNTLFVLMRLAKLKANNVFTAPCDTSVLYPKTGGNIHEFTAITPCAVLDVIGPPYSKDDGRDCSYYRDHPYAAFPNAEIAEVKEGNDNYSWLEEIEMPENSEMDGIEYLGPPIIESAL. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02194 329 CDD cupin_ADO 128 267 - -
Seca10g02194 329 Gene3D Jelly Rolls 53 285 IPR014710 -
Seca10g02194 329 SUPERFAMILY RmlC-like cupins 56 280 IPR011051 -
Seca10g02194 329 PANTHER UNCHARACTERIZED 59 324 IPR012864 GO:0016702
Seca10g02194 329 Pfam PCO_ADO 88 324 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02194 Seca-Chr10 25162695 25166194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02194 K23953 - gmx:100819405 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02194 10 25162695 25166194 Seca10g02194 10 25162695 25166194 ECH