Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02180 ATGCAGACGAGAACGGTTCAGGTGAAGCAAGTTTCAGATCTAGCTGGTGAGAGAGAGATTCACGAGTTCTTCTCATTTTCAGGAGAAATCGAGCACATTGAGATCCAAAGAGGATCCGGGCAATCAAAGACAGCATTTGTGACATTCAAAGACCCGAACGCTCTTGAAATAGCATTATTGTTATCGGGAGCAACATTAGTAGACCAGATTGTGAGTATAACTCCAGCTGAGAACTTTGTACCAAAACATGAGATGCAGAATTTCAATATACAGGAAGTAAGGATGGTAGAGAATGCTATAAATGTTGCTCCTTCTGAAAATGTTTCACTGAATATTGAGGAGGAAAAAGCTATTCCCACCAATGGAAGAATTTACATTAGTAGAGCACAAGATGTAGTTACAAGTGTGCTGGCAAAAGGTTCGGCATTAAGGCAAGATGCCTTGAACAAAGCTAAAGCATTTGACGAAAAGCATCAGTTGACTGCGAATGCATCTGCAAAGGTCATTTCTTTTGACAAGAGAGTGGGACTGACTGAGAAATTAACAGTTGGCATTTCTGTGGTGAATGAGAAAGTGAAATCTGTTGATCAAAGGCTTCAAGTTTCAGATAAGACTATGGCAGCAATATTTGCAGCTGAGAGAAAGTTGAATGATACTGGATCAGCAGTCAAAACAAGCAGATATGTGACTGCTGGAAGTGCATGGTTAAATGGTGCTTTCAGTAAGGTGGCAAAGGTTGGACAGGTTGCTGGTACTAAAACTAGAGAAAAATTTCATTTGGCTGTATCAAACTTGACAACAAAGGAACCACCAGTGGCTGCATAA 825 0.4048 MQTRTVQVKQVSDLAGEREIHEFFSFSGEIEHIEIQRGSGQSKTAFVTFKDPNALEIALLLSGATLVDQIVSITPAENFVPKHEMQNFNIQEVRMVENAINVAPSENVSLNIEEEKAIPTNGRIYISRAQDVVTSVLAKGSALRQDALNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTVGISVVNEKVKSVDQRLQVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGSAWLNGAFSKVAKVGQVAGTKTREKFHLAVSNLTTKEPPVAA. 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02180 274 SMART rrm1_1 5 74 IPR000504 GO:0003723
Seca10g02180 274 Gene3D - 1 87 IPR012677 -
Seca10g02180 274 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 259 - -
Seca10g02180 274 SUPERFAMILY RNA-binding domain, RBD 2 87 IPR035979 GO:0003676
Seca10g02180 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Seca10g02180 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 65 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca10g02180 Seca-Chr10 24986101 24990471 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02180 - - zju:107433520 431.024