Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02165 ATGGCGTCTTCTTCTTCCATGGCTGCTTCGGTTCTTCTCCTATACATGGCCACGCTATCTCTCCTTCAATCCGCGTCTGGGTCTTATTCCAGCACGTGCCTCCCCGTGCCTCCTTCGTTTCTCTATAATCTTCAGTCTCAATGCCCAATCTTGATCCAATCGAATACACCGCTTCAGGTGGGTGGAAGTTTCATAGAAGAAGTCTTATCTGGCAGAAAGAGGATTGAGTATATTTCTATACTCTTCTATGCTTCCTGGTGCCCATTTTCACGCAGAATGCTTCCTAAATTTGAAGTTCTTAGCTCCATGTTTCCTCATATAGAACATTTAGTTCTTGAGCAAGCATCAGCTTTGCCAAGCTTATATTCAAAATATGGAATTCACAGCTTGCCTGCTATATTACTGGTGAACCAGACATCAAGGTTGAGATATCACGGTCCAAACAACGTTCTCTCACTTTCGGAATTTTATGAAAGAAACACAAGATTTGAAGCAAGTAATGTTGTTGTTGGTCAACCAAGCAGCATGATGAGTGATGAAAATTCAACTCTGAAGTCCTTGATGGGTTTGTCACTTGAAGAAACATTAAGCAGGGAACCTTACCTGGTATTCTCTGTGTTGTTTCTCTGTTTGAGGATACTTCTTTTTGTATTTCCCAAGATTGTGTTGCGTCTCCAAGCATTCTGGGTTTCTTGCATTCCTCATCTGAACATGCAAATATTTGGTGAGACAAGCCAAGTGATGGGGCGTGTGCTTCAAGTGATTGATGTGAGGAGGATTTGGACCAAGCTAAGACTATGCAAGACCAGGAATTTTCATGAAAGGGCAAGGAGTGCCCGGGTTTGGGCTTCATCTCTGGCTTCAGTTTCTCTGGGTGAGTCATCATCAGCTAGGTTATCATCCCAAGGTTTGAACTAA 918 0.4292 MASSSSMAASVLLLYMATLSLLQSASGSYSSTCLPVPPSFLYNLQSQCPILIQSNTPLQVGGSFIEEVLSGRKRIEYISILFYASWCPFSRRMLPKFEVLSSMFPHIEHLVLEQASALPSLYSKYGIHSLPAILLVNQTSRLRYHGPNNVLSLSEFYERNTRFEASNVVVGQPSSMMSDENSTLKSLMGLSLEETLSREPYLVFSVLFLCLRILLFVFPKIVLRLQAFWVSCIPHLNMQIFGETSQVMGRVLQVIDVRRIWTKLRLCKTRNFHERARSARVWASSLASVSLGESSSARLSSQGLN. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02165 305 Gene3D Glutaredoxin 55 169 - -
Seca10g02165 305 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 5 301 IPR044794 -
Seca10g02165 305 Pfam Thioredoxin 77 154 IPR013766 -
Seca10g02165 305 SUPERFAMILY Thioredoxin-like 45 157 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02165 Seca-Chr10 24792351 24797760 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02165 - - aprc:113867833 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02165 10 24792351 24797760 Seca10g02165 10 24792351 24797760 ECH
Seca10g02165 10 24792351 24797760 Seca2g03543 2 109999664 110010024 PCT