Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02158 ATGGTTATGGGAGTGTCTACAGGCTATAATGGGCAAGATGATTGGAATGCTTATTCCAGATATGTGAACCTTAATGGAGGGATGACACAAGGTGTTTTGGGAGATAGCAGCTCTTATATGTATCATCAAGGTTATGGTTATGCACCATATGGATCATATCCGCCGCCCAGTTCTTCTCCATCCTTGCAACATGATGATAAGCTTTATGGGATGCAACAGTACCACTACCCTTCTCCTTATTACCAACCTCCGACTTCTGCCAATGTGTCATTTGCTACTAACAAAGCCAATGTTCAACAAGGGAAATTATCAAGTGCTGTTACTGCTGAACATACACCTTCATCAGTTGTTATGAATAAAGGAAGCACCTTTGGTGTGGTCAATGAAGATTCTACAAATAACAATGGGTCAAAGGAATTGTTACCAAGTTCCCAGCACTCAGCATTGAATTCAAATGATTCTTATCAAAGGGCTGGCTATCCTGCATATGTGCCTTTGTCAGGATATCAAGATCCAAGAGTAGGCACTCATGGGACTCAACCAGCAAACCCTTCAGATCCCTTATTATTTTCTGATAAGCAGTCAAAACATGGAGCAAAAATGGGATTTTCTTCACCAGCTGTGCCTGGCAAAGATTTTTCCACTCAAAGGAATACAACTATTCCTCAGCCATTTCCACAATTCACTAGCTTGCATGGTTCCATACATTCATCTGGACTGGGACTTGTCCCTGGATTCACTCATGGGATGTACCCAAGCAACATGATCTACAACCAATTTGGAAACACATATAGAGCTAGTCCTCATTTTGGACCTGCTGCATATGGATCTAGAGCAGGATTTGTTGATAACAAGATTAAATCCACAAGTGTTGGCCGTGTTGTTGATCATGTCAAAAAAAATATGGATGGCTTTGGTGAGCTGAATAAGGGACCAAGAGCTGCCAATAGTTCTGATGATAAAAATGTCAAAGGTCTTGGACCTGTCACATTATTACTCAAGGGACAGAACTTTCCTATTAAGAGTGATAGTAAAGAAGTGCAACCAGTTCCCAATAAGCAACAGTACAATGGAGAAGATTTATTTGAAAATTATTCTGATGCAAAATTCTTTGTCCTCAAATCTTACAGCGAGGACGATATTCATAAAAGCATAAAATATAGTGTTTGGACAAGCACCCCTAATGGCAACAAGAAGCTAGATGCAGCATATCAGGAAGCCAAGGAGAGGCCTGGTGACTGTCCTGTGTTTTTGCTGTTCTCGGTCAACACTAGTGGGCAATTTGTTGGTTTAGCAGAGATGGTAGGTCCAGTTGATTTTGGTAGAACGGTAGAGTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTGAAGTGGCATATCATGAAGGACATCCCAAATAGTGTGTTGAGACACATAACACTCGAAAACAATGAAAACAAACCTGTTACGAACAGTAGGGACACTCAGGAGGTTAAGTTTGAGAAGGGTATTCAAATTCTCAAAATTTTCAAGGAACATTCAAGCAAAACATGCATCCTCGATGACTTTGGGTTTTACGAGGCTCGTGAAAAGATGTTGCAGGAAAGAAAATCTAAGGAGCAACCGTTCACAAAACAGGTCAGCAAGTCCAATGATTTAGCAACAATTGGAACAGTTATCTTGCCCAAGTCTAATGATGGGACCTTGATGAATGAATCAGCTGCTGCTGATGCAGCAGGAGGAAGGGAGAAGGTGGTAGAAGTTAATGGATTGACTTCAGCACCTGAAGACTCATCAAAGAGCTGCTAA 1794 0.4136 MVMGVSTGYNGQDDWNAYSRYVNLNGGMTQGVLGDSSSYMYHQGYGYAPYGSYPPPSSSPSLQHDDKLYGMQQYHYPSPYYQPPTSANVSFATNKANVQQGKLSSAVTAEHTPSSVVMNKGSTFGVVNEDSTNNNGSKELLPSSQHSALNSNDSYQRAGYPAYVPLSGYQDPRVGTHGTQPANPSDPLLFSDKQSKHGAKMGFSSPAVPGKDFSTQRNTTIPQPFPQFTSLHGSIHSSGLGLVPGFTHGMYPSNMIYNQFGNTYRASPHFGPAAYGSRAGFVDNKIKSTSVGRVVDHVKKNMDGFGELNKGPRAANSSDDKNVKGLGPVTLLLKGQNFPIKSDSKEVQPVPNKQQYNGEDLFENYSDAKFFVLKSYSEDDIHKSIKYSVWTSTPNGNKKLDAAYQEAKERPGDCPVFLLFSVNTSGQFVGLAEMVGPVDFGRTVEYWQQDRWTGCFSVKWHIMKDIPNSVLRHITLENNENKPVTNSRDTQEVKFEKGIQILKIFKEHSSKTCILDDFGFYEAREKMLQERKSKEQPFTKQVSKSNDLATIGTVILPKSNDGTLMNESAAADAAGGREKVVEVNGLTSAPEDSSKSC. 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02158 597 MobiDBLite consensus disorder prediction 173 190 - -
Seca10g02158 597 Gene3D ph1033 like domains 346 519 - -
Seca10g02158 597 ProSiteProfiles YTH domain profile. 368 505 IPR007275 GO:0003723
Seca10g02158 597 FunFam YTH domain family 1, isoform CRA_a 347 520 - -
Seca10g02158 597 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 15 547 IPR045168 -
Seca10g02158 597 MobiDBLite consensus disorder prediction 126 154 - -
Seca10g02158 597 MobiDBLite consensus disorder prediction 166 211 - -
Seca10g02158 597 CDD YTH 369 505 IPR007275 GO:0003723
Seca10g02158 597 Pfam YT521-B-like domain 368 506 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02158 Seca-Chr10 24663491 24667437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g02158 - K20102 gmx:100789473 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02158 10 24663491 24667437 Seca10g02158 10 24663491 24667437 ECH