Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01997 ATGGAGAACAACGGAGAGGCACTAGCGCCGGTGCCGAGAGTGGCGGTGGTGGTGTTTCTATTGAAAGGCAGATCAGTCCTTCTCGGCCGCCGCCGCTCCTCCGTTGGCAACTCCACCTTCGCCCTTCCCGGCGGCCACCTCGAATTCGGGGAGAGCTTTGAGGAATGCGCGGTGAGAGAAGTGAAAGAGGAAACTGGGTTGGAGATAGGGAAAGCAGAGTTTTTGACGGTGACGAACAACGTGATGTTGGAGCAGCCAAAGAAGTGTCACTATGTCACCATTTTCATGAGGGCAGTGTTAGCTGATGATGCTCAAGAGAAGCAGGTGCCGCAGAATCTTGAGCCTGACAAGTGTGATGGTTGGGATTGGTATGATTGGGCCCATCTCCCGCACCCTTTATTTGGGCCTCTCGACAAGATGGTCAAAGGAGGTTTTGATCCATTTCCTCTCTGA 453 0.5364 MENNGEALAPVPRVAVVVFLLKGRSVLLGRRRSSVGNSTFALPGGHLEFGESFEECAVREVKEETGLEIGKAEFLTVTNNVMLEQPKKCHYVTIFMRAVLADDAQEKQVPQNLEPDKCDGWDWYDWAHLPHPLFGPLDKMVKGGFDPFPL. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01997 150 ProSitePatterns Nudix box signature. 45 66 IPR020084 GO:0016787
Seca10g01997 150 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 6 149 - -
Seca10g01997 150 FunFam Nucleotide triphosphate diphosphatase NUDT15 3 150 - -
Seca10g01997 150 ProSiteProfiles Nudix hydrolase domain profile. 11 146 IPR000086 -
Seca10g01997 150 CDD Nudix_Hydrolase_19 26 139 - -
Seca10g01997 150 Pfam NUDIX domain 13 133 IPR000086 -
Seca10g01997 150 SUPERFAMILY Nudix 4 139 IPR015797 -
Seca10g01997 150 PRINTS NUDIX hydrolase family signature 54 69 IPR020476 -
Seca10g01997 150 PRINTS NUDIX hydrolase family signature 40 54 IPR020476 -
Seca10g01997 150 PANTHER 8-OXO-DGTP DIPHOSPHATES NUDT15 5 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01997 Seca-Chr10 22726964 22728059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01997 K03574 K20986 gmx:100784492 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01997 10 22726964 22728059 Seca10g01997 10 22726964 22728059 ECH