Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01726 ATGAAACTTAGCATTTCCATTTTGGCCAAGCTTTTGATCCTGCAATATCTATCAGTTCTATGCCTTTCTCAGGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAAGCAGAGCTGCTGTTATCCGAAAACTGGAAAACCTGCAGCAGATTTCAGCATTCATGGACTCTGGCCTAACTACAATGATGGCTCATGGCCCTCAAACTGTGATCCTGACAGTGTCTTTGATAAATCTCTGATCTCAGACCTCATTAGCAGCATGGAGAAGAATTGGCCATCCCTGAGCTGCCCAAGTAGCAATGGTATGAGGTTCTGGTCACATGAATGGGAGAAACATGGTACATGTGCTGAATCTGAGCTTGATCAACATGAGTACTTTGAAACAACTCTCAAACTGAAGCAGAAAGTGAACCTCCTTCAGACCCTCAAGACAGCAGGTACACAATAA 468 0.4359 MKLSISILAKLLILQYLSVLCLSQDFDFFYFVQQWPGAYCDTKQSCCYPKTGKPAADFSIHGLWPNYNDGSWPSNCDPDSVFDKSLISDLISSMEKNWPSLSCPSSNGMRFWSHEWEKHGTCAESELDQHEYFETTLKLKQKVNLLQTLKTAGTQ. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01726 155 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Seca10g01726 155 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Seca10g01726 155 Pfam Ribonuclease T2 family 26 153 IPR001568 GO:0003723|GO:0033897
Seca10g01726 155 PANTHER RIBONUCLEASE T2 23 153 IPR001568 GO:0003723|GO:0033897
Seca10g01726 155 Gene3D - 20 155 IPR036430 GO:0003723|GO:0033897
Seca10g01726 155 CDD RNase_T2_euk 26 153 IPR033697 -
Seca10g01726 155 SUPERFAMILY Ribonuclease Rh-like 20 154 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01726 Seca-Chr10 19040076 19042487 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01726 K01166 - gmx:100306447 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01726 10 19040076 19042487 Seca10g01726 10 19040076 19042487 ECH