Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01684 ATGGGTAATTCTGGCAACAATCTTATTCAAGTGATAGCCAAGAACTTCGATGTTCTTGCTCTGCCCTTGGTCACCCTCGTTTACCCTTTATATGCTTCAATCAAGGCCATAGAGACCAGGTCTATTACTGATGATCAACAATGGCTCACCTATTGGGTTCTCTATTCTTTGATCACACTCTTCGAGCTCACATTTGCCAAAGTTCTTGAAGTGCTTCCAATTTGGCCTTATGCCAAGTTGATACTGAGTTGTTGGTTGGTTCTTCCACACTTTAATGGGGCAGCACATGTTTATAGACATTATGTTAGACCATTCTATATGAACCCACAAATGCCTCAAATCCCAGGAGCTTCTCAGATCTGGTATGTTCCGCGGAAGAACATATTTAGTAAGCAGGATGATGTCCTTACTGCTGCTGAGAGATACATGGAAGAGCATGGAACTGAGGCATTTGAAAGACTCATAAGCAAGGCTGACAGAGAAGCTAGAGCAAGGAGGAATGGAAATTATATGATCTTTGATGATGATTATAGATATTAA 540 0.4111 MGNSGNNLIQVIAKNFDVLALPLVTLVYPLYASIKAIETRSITDDQQWLTYWVLYSLITLFELTFAKVLEVLPIWPYAKLILSCWLVLPHFNGAAHVYRHYVRPFYMNPQMPQIPGASQIWYVPRKNIFSKQDDVLTAAERYMEEHGTEAFERLISKADREARARRNGNYMIFDDDYRY. 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01684 179 PANTHER HVA22-LIKE PROTEINS 22 146 IPR004345 -
Seca10g01684 179 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01684 Seca-Chr10 18553908 18557083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01684 K17279 - gmx:100306464 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01684 10 18553908 18557083 Seca10g01684 10 18553908 18557083 ECH