Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01667 ATGGCTTGTACTTGTACTCCGCTCTTTTCACCACCAACCACCACAACCGTCGCCGCCGTCAGCCACCACTCCTCCACTTCCCTCTTCCCGTTGTCCCCCATCAAATCCAACAACCCCCACCGTCGTCTCACAAGGCTCCACGTGTCCTCCCCCACCAACAAGCCGGGAAGCACCACCGTGTCCACCCCACCACCGCAAAAGCCCGCCGGAGAAACAATCTTCTTCGACGGAGGGGCCCACTACGGCGACCTCGTGTTAAATCTCTTGCTGGGCTTCACCCTGCTATGGCTGCCCTTAACCTTAGCGGCGGTGTCTAGAGCACTGTACCTGAGATACAGGTTCACTAACCTGAGAGTATCCGTTATCTCGGGCTTCACGGGCCAGGACCGAAGCGATTTCTCCTACGATGTGATAAAGGAAGTTCGGTTGGTGCCAAGGTTCATTGGTGAGTGGGGTGATGTTGTCCTCACCTTGAAGGATGGCACCAAGGTGGACCTAAGGAGTGTCCCCAAGTTCAGAGAGATTGCCAATTATTGTCTTGAAATGTCTATGCAGTCTCAGCCTCAGGTTTTGAATGAAAATGGCCCTAAGGGTTTTTAA 600 0.54 MACTCTPLFSPPTTTTVAAVSHHSSTSLFPLSPIKSNNPHRRLTRLHVSSPTNKPGSTTVSTPPPQKPAGETIFFDGGAHYGDLVLNLLLGFTLLWLPLTLAAVSRALYLRYRFTNLRVSVISGFTGQDRSDFSYDVIKEVRLVPRFIGEWGDVVLTLKDGTKVDLRSVPKFREIANYCLEMSMQSQPQVLNENGPKGF. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01667 199 Pfam Bacterial PH domain 111 179 IPR005182 -
Seca10g01667 199 MobiDBLite consensus disorder prediction 46 68 - -
Seca10g01667 199 PANTHER NAD(P)-LINKED OXIDOREDUCTASE SUPERFAMILY PROTEIN 6 199 - -
Seca10g01667 199 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01667 Seca-Chr10 18328078 18328677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01667 - - psat:127119549 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01667 10 18328078 18328677 Seca10g01667 10 18328078 18328677 ECH