Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01602 ATGTCAATAGTAGATCAATCACCATTCACGACTCCAAGAGGATCTATGTCATCAAGCATAGGTGACTCCACAGAACTTGAGGCCAATCTCACACTCAGCGATAAGCTCAAGGTTTTCAAAAGTTCCACCTTTGATCCCAATGCCTTTGTCGTTTCCAAATGCCACAGCATGAACGAGAAGGAGATAAAACATTTGTGCGCTTATCTTAATGACCTGAAGAAGGCTTCTGCAGAAGAAATGCGAAAAAGTGTTCTTGCTAATTACTCTGCCTTTATACGTACATCCAAAGAGATTTCAGATCTTGAGGGAGAGTTGCTTTCCATGAGAAATCTTCTATCCACTCAGGCTGCTTCGGTTCATGGTTTAGCAGAAGGGTGTCAGCTTAGTTCCTTGATGACTGTGAACGAAGATTCAGACATGGATGATATACTAAATGATCAAGCAGATATATCCAAGACAGAAAATTGGCTAATAAGATTTCTAGAAACGCTTGAAGTGTTATTAGCAGAGAAAAGAGTGGACGAGGCAATGGCTACCTTGGATGAAGGAGAAAGAATGACAAAAGAAATTAGTGAAGGGAGAACTTTGAGTCCAAGTTTATTCAAGGCTTTGAAAGATGCCATTACTGAATACAGAAAAAAATTAGCTGATCAGCTAGCCGAAACTATCTGCCAGCCATCAACTCGCACTGCAGAGATTCGCTCAAATGCACTGGCATTGAAAACTCTTGGGGATGGTCCTCGTGCTCATACATTACTACTTAAATCTCACAAAGGAAAGTTGCAGCGTAACATGCAAAGTCTTCACTCCACTACTTATGGTGGAGTTGGGGCATACACTGCTGCTCTTTCACAGCTTGTCTTTTCAACCATTTCACAAGCAGCATCAGATTCCCTGACAGTGTTTGCTGAAGAAGAACCTGCATATACTTCTGAGCTAGTAACTTGGGCAGTTACACAGGCTGAGGATTTTGCCCTTCTCCTTAAGAAACGTATTCTTGCCTCAACAGCTGCCGCAGGAGGTCTGAGAGTTGCATCTGAATGTGTTCATGTTTGCTTGAGTCACTGTCATCTGTTAGAGACTAGTGGACTGGCCCTTTCTCCTGTCTTACTAAAATATTTTAAACCTTTTGTTGAGCAAGCACTGAATACAAATTTGAAAAGAATTGAACAAAGTAGTGCTGCACTGGCTGCTGCAGATGATTGGTCGCTTGCTTATGCACCAACAAGCAGGAACACAGGCCTACCTCCATCTTCTTCTCACAGCAACTTGAGTTCATTCCAGCCAAAGCTTTCAAGCAGTGCTCACAAATTCAACTCAATGGTTCAGGAGCTTTTCGAAGATGTAGGACCTCTTGAAATCCTACAATTGGATGGTCTTGCACTTGAAGGCCTTCTACAAGTGTTCAACTTCTATGTCAACTTGTTAATAGATGCATTGCCAGCTTCAGTGGTAACTGAGAACCTGGAAGGCTCAGGACACAAAATTGTTAAGATTGCTGAGACTGAAGCACAACAGATAGCATTGCTGGCTAATGCAATACTGCTAGCAGATGAGTTGCTCCCGCGTGCTGTTGTCAAGCTTTCACATAGCACCAAAGGTGATGAATCTCAAAGAAGAGGATCAGATAAACAAAGGCCTCCAGAACAGCGTGAACTGAAGAAAAGGCTCCAACGTGAAGTTGATAGACTAAGAGACAGTTTCTGCCGGCAACATGTTCTTGAACTCATCTTCACTGAAGAAGGAGACACACTTCTGAATGCACATGTGTATTTGAGTATGGATGGGAAAGTGGAGCATCCTGACTGGTTTCCAACTCCAATTTTTCAGGAGTTTTTTGCAAAGCTTACACGAGTGGCAAACATTACAGCAGATGTGTTTGTGGGAAGGGACAGGTTTGCTACTATTTTATTGATGAGACTCGCAGAAACAGTGATCCTGTGGCTTTCTGATGACCAAGCCTTTTGGGAAGAGATTGAGACAGGTCCAGTGCCTTTGGGTCCTCTCGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAATATAATTAGTAGGGCTATTGATGCTGTTGCTGCTACAGGGTTAGATCCCAACAGTATTTTGCCGGAGGATGAGTGGTTTGTTGAAGTTTCTGAAATAGCCATAAAGATGTTAACTGGGAAAGCCTCCTTTGACAACATGGAGGGAGATGTTCATAGCCCCACTGCATCCTTTCAAGCATAA 2283 0.4262 MSIVDQSPFTTPRGSMSSSIGDSTELEANLTLSDKLKVFKSSTFDPNAFVVSKCHSMNEKEIKHLCAYLNDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAASVHGLAEGCQLSSLMTVNEDSDMDDILNDQADISKTENWLIRFLETLEVLLAEKRVDEAMATLDEGERMTKEISEGRTLSPSLFKALKDAITEYRKKLADQLAETICQPSTRTAEIRSNALALKTLGDGPRAHTLLLKSHKGKLQRNMQSLHSTTYGGVGAYTAALSQLVFSTISQAASDSLTVFAEEEPAYTSELVTWAVTQAEDFALLLKKRILASTAAAGGLRVASECVHVCLSHCHLLETSGLALSPVLLKYFKPFVEQALNTNLKRIEQSSAALAAADDWSLAYAPTSRNTGLPPSSSHSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLEILQLDGLALEGLLQVFNFYVNLLIDALPASVVTENLEGSGHKIVKIAETEAQQIALLANAILLADELLPRAVVKLSHSTKGDESQRRGSDKQRPPEQRELKKRLQREVDRLRDSFCRQHVLELIFTEEGDTLLNAHVYLSMDGKVEHPDWFPTPIFQEFFAKLTRVANITADVFVGRDRFATILLMRLAETVILWLSDDQAFWEEIETGPVPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIISRAIDAVAATGLDPNSILPEDEWFVEVSEIAIKMLTGKASFDNMEGDVHSPTASFQA. 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01602 760 MobiDBLite consensus disorder prediction 1 21 - -
Seca10g01602 760 FunFam Exocyst complex component EXO84B 144 267 - -
Seca10g01602 760 FunFam Exocyst complex component EXO84B 276 381 - -
Seca10g01602 760 Gene3D - 145 266 IPR042561 -
Seca10g01602 760 PANTHER EXOCYST COMPLEX COMPONENT 8 17 757 IPR033961 GO:0000145|GO:0006887
Seca10g01602 760 MobiDBLite consensus disorder prediction 531 554 - -
Seca10g01602 760 Pfam Vps51/Vps67 39 119 - -
Seca10g01602 760 Gene3D - 275 380 IPR042560 -
Seca10g01602 760 SUPERFAMILY Cullin repeat-like 149 382 IPR016159 -
Seca10g01602 760 Coils Coil 201 221 - -
Seca10g01602 760 Pfam Exocyst component 84 C-terminal 156 366 IPR032403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01602 Seca-Chr10 17601903 17607677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01602 K19986 - gmx:100818886 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01602 10 17601903 17607677 Seca10g01602 10 17601903 17607677 ECH