Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01600 ATGGGGGCGTGTGTGTCAACTCCAAGGAGTTGTGTTGGAGGGAGGTTGAGCTCCTCCAAGAGGAAAAACAGGAAGAGGAGGAGAGATGGATTCAGGAGAAGAGTTTCTTCTCGTTTGTCTAAGAGATCATTGGACAAGGTTGATGTGGCTAGGTTCCCTGATCATTCCTATGCCAACCCCACTTTCCAAGCAGGAAATATTGAGGAGGCATGGTTTGATTCAGTTGCAGTATTTGACTCTGACTGTGATGATGATTACCAGAGTGTTCCTGATGATGTTGTATCTGTGAATGGGATTGAAGGTGGATCGGTATCAAGTTTTCCATCTTCAAGAGATGCCAACCATAGAGTTTCAAGATATCCTGCAAATATCTCTGAGGCTGCCAGAAGTTCAGATGTTCAATATTTTGGTGTAGATGTCATTGATTCTCAATGTAAATGTGATGGAAATATAGTTGAAGTAAATGAACCTGTGTTTCTTGATGACATTTCATCAGTAGATGCGAATTCCAACAAGGATGAAGGAATTCTGGACAATTGTGGGATTCTTCCAAACAATTGTTTGCCATGTCTTGCATCTACCATTCCTTCTGTTGAAAAGAGAAGATCATCAAGTTCTAGCCCTCCTAATGCAAGGAAGAAAGCACCTATGAAACTCCCCTTTAAATGGAGGGAACATGGGAATGCTACTCTATTCTCCTCAAAGGCGCTTCTACAAAGACCAATTGCAGGTTCTCAAGTACCCTTTTGTCCAATTGAGAAGAAAATGCTTGATTGTTGGTCACACATTGACCCAAGCACTTTCAAAGTCCGAGGAGTAAATTATTTTAAGGATAGGAAGAAGGACTTTGCTCCTAACTATTCTGCATATTACCCATTTGGTGTAGATGTTTTCTTATCTCCACGAAAAGTAGACCATATAGCTAGGTTTGTGGAACTTCCTGTTATTAGTTCCTCTGGGAAATTTCCACCCATTCTTGTTGTAAATGTTCAGATTCCTCTCTACCCTGCCACACTTTTTCAAGGTGAAACTGATGGTGAAGGAATGTGCTTTGTTTTATACTTTAAACTTTCTGAAAGCTACTCCAAGGAACTTCCACTACATTTTCAAGAAAGCATCAGGAGATTGATGGATGATGAAGTTGAAAAGGTAAAGGGTTTTCCTGTAGATACAATCGTACCCTTCCGGGAAAGGTTGAAAATATTAGGACGTGTCGCCAATCTTGAAGATCTTCATCTGAGTGCAGCTGAAAGGAAGCTTATGCAGGCTTACAATGAGAAACCAGTTCTTTCACGTCCCCAACATGAGTTTTACTCGGGAGAAAATTACTTTGAGATTGATTTGGATATGCATAGATTTAGTTATATCTCCAGGAAAGGATTTGAAGCTTTCTTGGACAGATTAAAGATCTGCACTTTAGATGTTGGCCTAACAATTCAGGGGAACAAAGCAGAGGAGCTACCAGAGCAGGTTTTATGTTGTATTAGGTTAAATGGCATTGATTACATGAATTATCAACAACTGGGGCAAACTCAGGATTCAATGTAA 1548 0.4025 MGACVSTPRSCVGGRLSSSKRKNRKRRRDGFRRRVSSRLSKRSLDKVDVARFPDHSYANPTFQAGNIEEAWFDSVAVFDSDCDDDYQSVPDDVVSVNGIEGGSVSSFPSSRDANHRVSRYPANISEAARSSDVQYFGVDVIDSQCKCDGNIVEVNEPVFLDDISSVDANSNKDEGILDNCGILPNNCLPCLASTIPSVEKRRSSSSSPPNARKKAPMKLPFKWREHGNATLFSSKALLQRPIAGSQVPFCPIEKKMLDCWSHIDPSTFKVRGVNYFKDRKKDFAPNYSAYYPFGVDVFLSPRKVDHIARFVELPVISSSGKFPPILVVNVQIPLYPATLFQGETDGEGMCFVLYFKLSESYSKELPLHFQESIRRLMDDEVEKVKGFPVDTIVPFRERLKILGRVANLEDLHLSAAERKLMQAYNEKPVLSRPQHEFYSGENYFEIDLDMHRFSYISRKGFEAFLDRLKICTLDVGLTIQGNKAEELPEQVLCCIRLNGIDYMNYQQLGQTQDSM. 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01600 515 MobiDBLite consensus disorder prediction 1 37 - -
Seca10g01600 515 MobiDBLite consensus disorder prediction 18 35 - -
Seca10g01600 515 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 260 501 IPR009769 -
Seca10g01600 515 PANTHER CW14 PROTEIN 1 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01600 Seca-Chr10 17593026 17597819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01600 - - aprc:113869019 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01600 10 17593026 17597819 Seca10g01600 10 17593026 17597819 ECH
Seca10g01600 10 17593026 17597819 Seca10g01600 10 17593026 17597819 PCT