Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01584 ATGGACATGGCATCTAAAAACCACTACCATCACTCGCTATTGTATCCCTCATCTTCAAACAAAAGCGGAACCATTCATAACAAACAAACTTCCATGGAAGCGGGAACTGCGCTCCGTGTTCGTCTAACTCTCATTCTCAACACTCACATTCCCAATCGCACTGCTAATTCAATAACCGCATTCCAATCGCGCTTCACTCTTTCCTCTTCATCTTCTCATTCTTCCTCTGCCGCTTATAGTTACCGAGGGCCCAAACCCAAACGCGACTTTCTCGCCGATTGGGTGTCCCAAAACGACGACGTCGTTCGAACCTTACCAATCTACGTCGGCTCCGCTTCCCTCTTCGCCGTCCTCTTCAATCGCGCCATTTCCGGTATCGCCCCCGTCGCTGACGCCGGCAGCTCACAATCCAGAGCTGACCTCTTGACCTTAGGATTGGCCGTCACCAATATTTTGGCTGGCCTCGTCTGGCTTTCTATTAGACCCAAATCTATAACTGTGGTAAATCCCCAGGGGGTTGAATGCAAGAGGTTGTGCACTGCTCTCCCTGATGTTGCACTTACTGAGTTGCTCTGGGTGTGGGAATCTCTTTCAGATGTCACCTGCTGCCGATCACTTGTTATTGTTTATGAGAGCAGTTGTGTACTTCAAATTGGTTTTGCTGCAGAATCTTCTCCTTGGAATGGTGAGGCTGTAAGTGTCGATGCCAATAAATTGATGCAAGGATCAGTATATCAGGGTGTCATGAAATCTGGAGCCCAGAGTTACTTGGCTAATCTATCTCTTTATCCTGGGAGATCTGAGCTGCCATTTCTGCCTTCAAATACTCAGGCAGTAATTTTACAACCACTTGGAGATAAAGGGATTGCAATTATTGGTGGTGACACAATACGAGGTTTCACAACTTCTGATCAGGCATGGATTTCGTTTATCGGAGAGAAGCTGGATTCTACCCTTGCAAAATATGCGGAGCGTCTCCCTCTTACTTCCCATGATTAA 999 0.4715 MDMASKNHYHHSLLYPSSSNKSGTIHNKQTSMEAGTALRVRLTLILNTHIPNRTANSITAFQSRFTLSSSSSHSSSAAYSYRGPKPKRDFLADWVSQNDDVVRTLPIYVGSASLFAVLFNRAISGIAPVADAGSSQSRADLLTLGLAVTNILAGLVWLSIRPKSITVVNPQGVECKRLCTALPDVALTELLWVWESLSDVTCCRSLVIVYESSCVLQIGFAAESSPWNGEAVSVDANKLMQGSVYQGVMKSGAQSYLANLSLYPGRSELPFLPSNTQAVILQPLGDKGIAIIGGDTIRGFTTSDQAWISFIGEKLDSTLAKYAERLPLTSHD. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01584 332 Pfam Cofactor assembly of complex C subunit B, CCB2/CCB4 105 315 IPR021325 -
Seca10g01584 332 PANTHER - 32 325 IPR044705 -
Seca10g01584 332 MobiDBLite consensus disorder prediction 1 26 - -
Seca10g01584 332 MobiDBLite consensus disorder prediction 11 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01584 Seca-Chr10 17211698 17215903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01584 - - gmx:100776666 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01584 10 17211698 17215903 Seca10g01584 10 17211698 17215903 ECH