Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01583 ATGGACACAGAGCAACGGCGGAAGAGGAAGCGAGTGATAGGGAGGCACCTTCATCTGTCTTCAAGGTCGTTTTTTCTTTGCTTCTCCTTCTTCGTCTTCCTCCTCTTCTTATCCAACCACCATGGATTCTTCACCTCCTCCACTTTCCGACCCCCTCTTACAGCCTCCACCTTATCCCTCCTCTACTCCTCCGCAAGCCACTCCATTCTAGACCCTCCCCGCCCCACCACTGCTACCACCTCTTTCACCCTCCAACACCGCATCCTCCTCCCCGACCACTACCTCCTCATCCTCACTAACCACCAAAAAAACCAATTTCACCCTCCCCACGAACTAGAGTGCGTCTACTACACCTTACTCCCCAACGGTTCCTCTTCCGCTTCACCCGAACCGGTCCTTGATGTTGAGGTTCAACCGGTCCTGTCCACCGACCGGTACGATGAATCTCGATCCATTACCAGGTGCCCATTTCCCCGGACGAATTACTCCGCCACCAGCGGCTCCGAAGTTGTCGACTTGCGGCGGCGCGGCGAGGTGGGTCGCCGGAGTTTGGGTTTTTTGAGGAATCAAACGCTTCAAATTTGGGATAGGGTGGCGTACGAGGCCACCCTGGACGGAGACACGGTTGTGGTTTTCGTTAAAGGGCTGAATCTGCGACCCCACAAGATCTCTGATCCGACCCATTTCCGATGCCATTTCGGGCTCAAGAATTTCCACAAAGACGGTGCCTTTTTGCTCAGCACCAGAGCAGTTTCGGTGGCTCAAGAAATCGTGAGGTGCATGTTGCCGCAGAGCATCAGGAACAACCCGGACAAGGCTCGAGGGATTCGGGTCACGGTGAGTCACTTGAGTGGCAATGTGAGGCACCCGGTTCGTGCCCTTGTGCCTTCTGTGGCTAGAGTTGGAAGCCCTGGTGGTGCAAGGATTCAGAGGAAGAATAGAAACAAGTATGAACTGTGTGTGTGTACAATGGTGTGGAACCAGGCTTCTGCACTCAGGGAGTGGGTTATGTACCATGCCTGGCTTGGAGTGGAGCGCTGGTTTATCTATGATAACAACAGTGATGATGATATTGAACAAGTGATTCAGGATCTTGATCTTCAAGGGTATAATGTTAGTAGACAGGCCTGGCCTTGGATTAAGACTCAAGAAGCAGGGTTTTCCCACTGTGCATTGAGGGCTAGAGAGGAGTGCAGATGGGTGGGGTTCTTTGATGTTGATGAGTTCTTCTACTTCCCCAATGAGTTTCATCACCAGATGGGGCAGGGTGTTCCTGGTGAGAATTCTCTGAGATCGGTGGTTGCCAATTACTCATCCTCAAAATCCATTGCGGAGATAAGAACAGCTTGCCATAGCTTTGGGCCTTCTGGGTTGAACTCGCCCCCTAAACAAGGGGTTACTGTAGGATACACATGCCGGCTTCAGAGCCCCGAGCGGCACAAATCCATTGTGCGACCGGATTTGCTTGATACCACTCTTCTGAATGTGGTGCACCATTTTCATCTGAGGGAGGGGTACAGGTACAGCAACATGCCTGAAGGTACTGCTATAATAAACCACTATAAGTACCAGGTATGGGAGACCTTCAAAGCCAAGTTCTTCAGAAGGGTTGCTACCTATGTTGTCGACTGGCAGGAGGACCAAAACAAAGGATCAAAGGATAGAGCACCGGGACTAGGAACAGAGGCCATTGAACCACCTAACTGGCGGTTGCAGTTTTGTGAGGTTTGGGATACTGGCCTGAAGGACTTCCTTCTGTCTTATTTTGCTGATCCTGCAACAGGGTTGATGCCCTGGGAAAGGTCTTTTCTATAA 1815 0.5152 MDTEQRRKRKRVIGRHLHLSSRSFFLCFSFFVFLLFLSNHHGFFTSSTFRPPLTASTLSLLYSSASHSILDPPRPTTATTSFTLQHRILLPDHYLLILTNHQKNQFHPPHELECVYYTLLPNGSSSASPEPVLDVEVQPVLSTDRYDESRSITRCPFPRTNYSATSGSEVVDLRRRGEVGRRSLGFLRNQTLQIWDRVAYEATLDGDTVVVFVKGLNLRPHKISDPTHFRCHFGLKNFHKDGAFLLSTRAVSVAQEIVRCMLPQSIRNNPDKARGIRVTVSHLSGNVRHPVRALVPSVARVGSPGGARIQRKNRNKYELCVCTMVWNQASALREWVMYHAWLGVERWFIYDNNSDDDIEQVIQDLDLQGYNVSRQAWPWIKTQEAGFSHCALRAREECRWVGFFDVDEFFYFPNEFHHQMGQGVPGENSLRSVVANYSSSKSIAEIRTACHSFGPSGLNSPPKQGVTVGYTCRLQSPERHKSIVRPDLLDTTLLNVVHHFHLREGYRYSNMPEGTAIINHYKYQVWETFKAKFFRRVATYVVDWQEDQNKGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLKDFLLSYFADPATGLMPWERSFL. 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01583 604 PANTHER UNCHARACTERIZED 26 593 - -
Seca10g01583 604 Pfam Glycosyltransferase family 92 316 566 IPR008166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01583 Seca-Chr10 17208828 17210642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01583 - - gmx:100781994 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01583 10 17208828 17210642 Seca10g01583 10 17208828 17210642 ECH
Seca10g01583 10 17208828 17210642 Seca10g01583 10 17208828 17210642 PCT