Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01576 ATGGGAGAGACTGCTGCTTCCAATCCTGCTTTGCAAGTGTCTGTTTCGTTTGGCAGATTTGAGAATGATTCATTGTCTTGGGAGAGGTGGTCGTCTTTTTCTCCAAATAAGTACTTGGAAGAAGTTGAGAAGTGTGCCACTCCTGGATCAGTAGCCCAGAAGAAAGCTTACTTTGAAGCCCATTACAAGAAGGTTGCTGCCCGGAAAGCTGAATTGCTGGCTCAAGAGAAGCAAACTGAGAAAGATTCTTTCAGATCAGAAGATCAAAATGGTATAGATCTGAGTGGTAACACTTGTGGGAATGATGCAGAATTTGATATATCCAACACTCAAGGTTCCATTGAAGTGGTTAAGCAAGAAATCAGCTCTGCTGATGAGATCAACAGGAGCCATGTGGATAACTTGAAGGAGGAAATTGCAGTTTCAAGAGATTACCAAAGCTCATCAGTTGAGTTAGAGAACAAGGAGCTGGAAAATATATCACATAGTTCCCTCCAGATAGATGAACCTGAAGCTGAAGAAGATGTGTGCATAAAACAAGAAGACAATCTTAACATTGAAGCTGAAGATGTGAAGGAAATTTCACACGTTGTGTATAAGGAAACAGAAAAGGCTTCAGAAGTTGAAGCAAAAGATGTAAATTTGGATAAGCCAAAGGAATCTAAGGTTACCTCCGTGAATAGGGAAAGCAATGCAGCCAAGACTAAGAAGAAAACAATGCAACCTAAACCTAAGACATCTCAAATTTCCACACCAAGAAGTTCAAAGCCTACAACAACTCCGACCAGAACATTGGCATCTGCCCCTTCAACTAAAAAGGGAAATTCTCCATCTTTATCTAGGAGGCAAATTACTTCCGGTGGGGAGAACAAAAAAGTTGCCAACAAATCTTTGCACATGTCCCTGAGCTTGGGTCCAAGTAATCCTGATCCAGCTCCTCATACTACCATGAGGAAATCTTTAATTATGGAGAAAATGGGGGATAAGGACATAGTCAAACGAGCATTTAAGACATTCCAGAACAATTTCAACCAACCAAAAACTTCTGGTGAAGACAGATCTTTGGTAAAAAAGCAGGGGCAGGTTCCTTCAAGGGGGACCGTATCAAAGGTTCCAAGTCCAACATCTACAACTTTGCGGAAAGAAAATGGACGGCCAAATAAGGTTGAGAGTATAGATAAAAGAAGTGGAAATGCTGTACGAACTACTGTAGGCCCAAAAAGTGACATTAGAGCAAAGAAGGGGAAAGAGTCTTCAAGAAAAATAGAGGAAAAAACTATTGCAAAAGGTGTAGAAAGAACGCGTCTTCAATCAAAATTGAAGGAGGAAAAAGAGGCAGAGATGAAAAAGCTAAAACATAATATCAAGGCCACACCCCTACCAGCTTTTTACCGTGGTCAAACAGTATCAAAAAGTCGTCCAGAAAAGGGTGGTGCTAAGACTGAGAACCCTCGATAA 1458 0.4095 MGETAASNPALQVSVSFGRFENDSLSWERWSSFSPNKYLEEVEKCATPGSVAQKKAYFEAHYKKVAARKAELLAQEKQTEKDSFRSEDQNGIDLSGNTCGNDAEFDISNTQGSIEVVKQEISSADEINRSHVDNLKEEIAVSRDYQSSSVELENKELENISHSSLQIDEPEAEEDVCIKQEDNLNIEAEDVKEISHVVYKETEKASEVEAKDVNLDKPKESKVTSVNRESNAAKTKKKTMQPKPKTSQISTPRSSKPTTTPTRTLASAPSTKKGNSPSLSRRQITSGGENKKVANKSLHMSLSLGPSNPDPAPHTTMRKSLIMEKMGDKDIVKRAFKTFQNNFNQPKTSGEDRSLVKKQGQVPSRGTVSKVPSPTSTTLRKENGRPNKVESIDKRSGNAVRTTVGPKSDIRAKKGKESSRKIEEKTIAKGVERTRLQSKLKEEKEAEMKKLKHNIKATPLPAFYRGQTVSKSRPEKGGAKTENPR. 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01576 485 Coils Coil 67 87 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 440 485 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 77 98 - -
Seca10g01576 485 PANTHER F3I6.9 PROTEIN 1 476 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 360 382 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 340 421 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 407 421 - -
Seca10g01576 485 Pfam Targeting protein for Xklp2 (TPX2) domain 407 474 IPR027329 -
Seca10g01576 485 MobiDBLite consensus disorder prediction 242 314 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 200 224 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 440 454 - -
Seca10g01576 485 MobiDBLite consensus disorder prediction 200 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01576 Seca-Chr10 17077647 17083173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01576 - - gmx:100810690 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01576 10 17077647 17083173 Seca10g01576 10 17077647 17083173 ECH