Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01570 ATGGAGTGCGCGGCGAAGGGGATCAGAACACGGTGCAGCGCCGCCGCCGCAACGAGACTATGTGCTCGCTGCGAAGCCGTTGCTTACTGCTCCCTCTCTCACCAGATTGCACACTGGAGTCATCATAAACATGAGTGTGATAGATTACAAGAACAGATGAAAAGTGTCCATGTCCTCAATGATTATCCCTTCACTTTCTCTCGGGAAGCCACGTTTCAGGTTTGTGCAAAGCAGGAAACTAGGTGTTCATTTTTGAGCAAGAGAGGCCTTCATCAATTGGGAATGTGGATGCATGAATGCCATTGCGGGACATCATCTGCTTCATTTGATTGTTTAGGGTTAAACAATGGCTGGGATCTCCCAAGTAGTTTGTGTCCATGTCGTGGGCCTGACACTCCAGTGTCAGAGCAGTTGCATAGTTGGAGAGACTACTATAAGTGGAGGTGTATCCCGCTGGAGTCACCTGTTGCTTTGCTTCTTCACTGGCCACTTACAATATATCATGCTGCTCAACTTGTTGGAGTTACAACCTTGAATCCTGAAGTCAATGATAAGTTGTATATACATTACCTTGGACCTGAGCAAGAGCTGCTACAACTTCCTGTGTTTGGAGAATTACAGGCGCTCTTCCCTGGTGTACATATTCATATAGAACTCGTTGGACCTGCAATTCCTCCTCAAAGGTCTGACGCATTGCTCATAAGTCATTGA 711 0.4684 MECAAKGIRTRCSAAAATRLCARCEAVAYCSLSHQIAHWSHHKHECDRLQEQMKSVHVLNDYPFTFSREATFQVCAKQETRCSFLSKRGLHQLGMWMHECHCGTSSASFDCLGLNNGWDLPSSLCPCRGPDTPVSEQLHSWRDYYKWRCIPLESPVALLLHWPLTIYHAAQLVGVTTLNPEVNDKLYIHYLGPEQELLQLPVFGELQALFPGVHIHIELVGPAIPPQRSDALLISH. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01570 236 Gene3D - 2 53 - -
Seca10g01570 236 SUPERFAMILY HIT/MYND zinc finger-like 16 51 - -
Seca10g01570 236 Pfam MYND finger 11 46 IPR002893 -
Seca10g01570 236 ProSiteProfiles Zinc finger MYND-type profile. 9 46 IPR002893 -
Seca10g01570 236 Pfam MSS51 C-terminal domain 163 229 IPR046824 -
Seca10g01570 236 PANTHER ZINC ION BINDING PROTEIN 2 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01570 Seca-Chr10 17036056 17038296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01570 K24081 - gmx:100808017 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01570 10 17036056 17038296 Seca10g01570 10 17036056 17038296 ECH