Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01482 ATGCAAGCCGTTTCGGTTTTACCTTTGCCGTCTAAATTTAGGGATTCTACTGATGAATTCGCTCAGGCTTCTGGAAAGTTCGAACACGATTTCATGGCCAAGCTCAAAATTGAAGACGAAAACATCGAAAACGAAGATGAGGTAGAAGAACAAGAGGAAGATGAGGAAGAAGAGTTTAGCTTCGTTTTCGCGAATCCTGCTGGATCTCCGATCTCCGCCGAAGACGCGTTCGCCGACGGCCAGATACGTCCGGTTTTCCCTATTTTCGATCAGAATCTTCTATTCGCCGACGATTACGACGGTGTTTCTGAACTCAGTCCGAAGGTAAAGAAGGTCTTCGTCCAACAGCCAGACGATTCGCCGTCTCCGTCTTCGTCGGAGACCGCGGCGGTGCCGGAAGGGCCGTTCTGCGAGTGGTCTCCAAAAACGGCGGTGAAGAGCAACTCGACGGGGTTCTCGAAGCTGTGGAGGTTTCGGGAAGTGAAGCTCCGGAGCAACAGCGACGGAAAGGACGCTTTCGTGTTCTTGAACCCGCCGGCGGCGAAGCCGGAGAAGGCGAGCGCCGACGAGGCGAAAAACGTCGCAGTAAAGAAGGTAAAAGTGGTAAAGGGGAAAACGGCGTCGTCGGCGCACGAGAAGCATTACGTTATGAGTAGAGCAAGGAAGGAGAATGATAAACGCAAGTCTTACTTGCCGTATAGGCAAGAACTGTTTGGGTTCTTCGCCAATACCAACGGATTGAGCAGGAACGTTCATCCTTACTGA 765 0.5163 MQAVSVLPLPSKFRDSTDEFAQASGKFEHDFMAKLKIEDENIENEDEVEEQEEDEEEEFSFVFANPAGSPISAEDAFADGQIRPVFPIFDQNLLFADDYDGVSELSPKVKKVFVQQPDDSPSPSSSETAAVPEGPFCEWSPKTAVKSNSTGFSKLWRFREVKLRSNSDGKDAFVFLNPPAAKPEKASADEAKNVAVKKVKVVKGKTASSAHEKHYVMSRARKENDKRKSYLPYRQELFGFFANTNGLSRNVHPY. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01482 254 MobiDBLite consensus disorder prediction 42 57 - -
Seca10g01482 254 Coils Coil 32 57 - -
Seca10g01482 254 Pfam Protein of unknown function (DUF1645) 73 232 IPR012442 -
Seca10g01482 254 PANTHER OS07G0619500 PROTEIN 37 252 - -
Seca10g01482 254 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01482 Seca-Chr10 15963452 15964216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01482 - - ccaj:109801205 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01482 10 15963452 15964216 Seca10g01482 10 15963452 15964216 ECH
Seca10g01482 10 15963452 15964216 Seca10g01482 10 15963452 15964216 PCT