Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01468 ATGCAGGAATTGGAGCAGTTGAAGGAACAGGCTTCTCGCTTGTGGCTTATAGCCACGGATTATCTTCGTGAGGTTCCCCCCAATCAGCTCTACGCCGCTGCTGCTATCGCGGTTTTCACAACCCTGCTTCTTCTCTCATTACGGTTGTTCAAGCGCGCAAAGTCTAACACCATTGTGTTGACTGGGCTCAGTGGGAGTGGGAAAACTGTTCTCTTCTACCAGCTTAGGGATGGCTCTACTCATCAGGGTACTGTTACATCAATGGAACCTAATGAAGGCACTTTTATTCTTCATGGTGAAACAACAAAGAAGGGCAAGATAAAACCTGTTCATGTTGTTGATGTTCCTGGGCATTCTCGTCTTCGACCCAAACTGGATGATTACTTGCCTCAAGCAGCTGGCATAGTCTTTGTGGTTGATGCTTTAGACTTCTTACCAAATTGCCGTGCTGCTTCAGAGTACCTATATGATATATTGACCAAGGGAAGTGTTGTGAAGAAGAAGATTCCACTGCTTATTCTCTGCAACAAAACAGACAAAGTCACTGCTCATACCAAAGAATTTATCCGCAGACAGTTGGAGAAGGAAATCGACAAATTACGGGCATCAAGAAGTGCAGTATCAGCAGCTGACATAACAAATGAGTTCACTCTGGGGGTACCTGGTGAGCCATTTTCTTTTACTCAGTGCTCTAACAAAGTTACAACTGCGGATGCTTCTGGTTTAACTGGGGAGATATCTCAGCTGGAAGAGTTTATCAGAGAATATGTGAAGGCATAG 780 0.4474 MQELEQLKEQASRLWLIATDYLREVPPNQLYAAAAIAVFTTLLLLSLRLFKRAKSNTIVLTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHVVDVPGHSRLRPKLDDYLPQAAGIVFVVDALDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHTKEFIRRQLEKEIDKLRASRSAVSAADITNEFTLGVPGEPFSFTQCSNKVTTADASGLTGEISQLEEFIREYVKA. 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01468 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
Seca10g01468 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Seca10g01468 259 PANTHER TRANSFERRIN 28 257 - -
Seca10g01468 259 Coils Coil 190 210 - -
Seca10g01468 259 CDD SR_beta 56 256 IPR019009 -
Seca10g01468 259 Gene3D - 50 257 IPR027417 -
Seca10g01468 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01468 Seca-Chr10 15818727 15822190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01468 1 258 Miscellaneous Gene Families AT5G05670 73.359 1.65e-140 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01468 K12272 - gmx:100800572 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01468 10 15818727 15822190 Seca10g01468 10 15818727 15822190 ECH