Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01460 ATGGCAACCTTCCTTCTTCCTTCTTCCACTTTCCCACCAACATCGATTCGCTGCGCAAACGAGCGCCGGGCGCTGTTTAACCGCATTACTCCTGTCTATGATAACCTGAATGATTTGCTGAGCTTGGGTCAGCACCGAATTTGGAAGCGAATGGCGGTTTCCTGGACTGGAGCAAAAATGGGAGACCGTGTGTTGGATGTGTGCTGTGGAAGTGGAGATTTAGCATTTCTCTTGTCCGAGAAAGTTGGCTCCGATGGCAAGGTGATTGGTATTGATTTCTCGAAGGAACTGCTATTGATTGCCTCATCACGGCAGCGCTCGCTTTCAAAGAACTGCTTCACGAACATTGAGTGGGTTGAAGGTGATGCTCTTGACTTGCCATTTGCTGATGGTTGGTTTGATGCTATCACTATGGGTTATGGTCTTAGAAATGTGGTAGATAAGCGGAAAGCTATGCAGGAAATATTTCGTGTCCTGAAAGATGGCTCTAGAGTGTCTATTCTTGACTTCAATAAGAGCAACAACTCACTGACATCTTCAATTACGGAATGGATGATTGACAAGGTTGTTGTCCCTGTAGCCTCTGGTTATGGCCTTTCAGAGGATTACAGATATCTCAAGAGTTCAATAAGAGAATTTTTAACAGGGAAGGAATTGGAGGAACTTGCTTTAGAAGTAGGATTTTCTACTGCCCGACATTATGAGATCAGTGGAGGCTTAATGGGATGCCTGGTAGCTAAACGTTAG 747 0.4511 MATFLLPSSTFPPTSIRCANERRALFNRITPVYDNLNDLLSLGQHRIWKRMAVSWTGAKMGDRVLDVCCGSGDLAFLLSEKVGSDGKVIGIDFSKELLLIASSRQRSLSKNCFTNIEWVEGDALDLPFADGWFDAITMGYGLRNVVDKRKAMQEIFRVLKDGSRVSILDFNKSNNSLTSSITEWMIDKVVVPVASGYGLSEDYRYLKSSIREFLTGKELEELALEVGFSTARHYEISGGLMGCLVAKR. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01460 248 Pfam ubiE/COQ5 methyltransferase family 24 242 - -
Seca10g01460 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 240 IPR029063 -
Seca10g01460 248 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 33 48 IPR023576 GO:0008168
Seca10g01460 248 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 24 247 IPR004033 GO:0008168
Seca10g01460 248 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 21 248 IPR032904 GO:0042372|GO:0052624
Seca10g01460 248 CDD AdoMet_MTases 63 167 - -
Seca10g01460 248 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 13 248 IPR004033 GO:0008168
Seca10g01460 248 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 14 248 IPR004033 GO:0008168
Seca10g01460 248 Gene3D Vaccinia Virus protein VP39 29 248 IPR029063 -
Seca10g01460 248 PANTHER METHYLTRANSFERASE 29 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01460 Seca-Chr10 15674333 15679109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01460 59 185 Acyl Lipid Metabolism Gene Families AT3G18000 30.709 1.60e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01460 K23095 - gmx:100789470 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01460 10 15674333 15679109 Seca10g01460 10 15674333 15679109 ECH