Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01306 ATGCTTTATCTATCTTCTATTTATTTTTGTAGAGATAACCTAGAGAGCTATACAAGTGACTACACTGCACAAGTCTTGGTGGGATACTGCGTGGTTTATATTTTCATGCAGACTTTCATGATTCCAGGGACTGTGTTCATGTCATTGCTTGCTGGAGCACTCTTTGGAGTCTTTAAAGGTGTGGCTCTGGTTGTATTCACTGCCACAGCAGGAGCTTCTTCATGCTTTTTCCTGTCAAAATTGATTGGACGACCTCTTCTCTCCTCTCTCTGGCCAGACAAGTTGAAATTCTTTCAAACCCAGGTGGCTAAAAGAAGAAAAAGTTTGCTGAACTACATGCTTTTTCTAAGGCTGACTCCAACACTGCCTAACACATTTATTAATTTTGCATCACCAATTGTGGATGTGCCTTATCATATTTTCTTCCTGGGAACTGTCATTGGACTCATTCCTGCTGCTTATGTCACTGTCAGGGCTGGGTTAGCTCTTGGAGAGTTGCAATCTGTGGGGGATCTCTATGATTTCAACTCAATTGCTACGTTGTTCTTCATAGGTGTTGTTTCAGTTACACCCACACTAATGAGCAAGAGCGAGTCATAG 600 0.4183 MLYLSSIYFCRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCFFLSKLIGRPLLSSLWPDKLKFFQTQVAKRRKSLLNYMLFLRLTPTLPNTFINFASPIVDVPYHIFFLGTVIGLIPAAYVTVRAGLALGELQSVGDLYDFNSIATLFFIGVVSVTPTLMSKSES. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01306 199 Pfam SNARE associated Golgi protein 41 160 IPR032816 -
Seca10g01306 199 PANTHER - 8 196 IPR045014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01306 Seca-Chr10 13108341 13111243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01306 - - mtr:11434957 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01306 10 13108341 13111243 Seca10g01306 10 13108341 13111243 ECH