Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01257 ATGGCTGCTCTGCAATACCTGGAATCGCTGCGCAGTTCGCACCCTGAGCTCTCTGATTGGTACAATTCGCTTGCGGATCTGTACCAGAAGAAGCTCTGGCACCAGCTCACTCTCAAGCTTGAGCAGTTCGTCGCTCTTGCTGTCTTTCAGGCTGGTGATGCTCTGATACAGTTATATAACAATTTCATCACAGACTTCGAGACCAAAATCAACCTTCTCAAGCTTGCACATTTTGCTGTGATGGTTTCTCGGAGGTATTCTGAGAAAGAAGCTGCCATTGGTTATCTTGAAGGGGTCATTGAGAAACTGCAAGCCACTAAAGAGCAGCGCATAGAAGAACCCATTCTATACATTAAGATGCAAATAGCCTTGTTTAAGCTTGAGCAAGGTGACCAAAAGGAATGCAAGAATCTTCTAGAAGATGGAAAGAGTACACTAGACAGCATGACAGATATTGATCCAACTGTGTATGCTAGCTATTACTGGGTATCTTCTCAGTATCATAAATCCCGCCAGGAATTTGCTGAGTTCTATAAAAGTGCTCTTCTCTATTTGGCATACACATCAGTGGAGTCTCTCTCAGATTCATTCAAGCTGGATTTGGCATTTGATTTGTCCCTTTCTGCTCTGCTCGGGGATAACATCTACAACTTTGGAGAGCTACTTGCCCATCCTATTATCAAGAGCCTTCTGGGGACAAAGGTGGAATGGCTTTACTATATTCTGCAGGCATTCAATTCTGGTGATTTAGTTCGATATCAAGAGTTATGTCAGGTGCATAATGCTGCTTTAAGGGCTCAACCAGCACTAGTTCAAAATGAACAGAAGTTGTTGGAAAAGATCAACATTCTCTGCCTGATGGAGATTATATTCAGTCGGCCTTCGGAAGATCGAACTATTCCCTTGAGTGTAATTGCAGAGCGTACAAAACTTTCTATAGAGGATGTGGAGCATCTCCTTATGAAGAGCCTATCTGTAAGTTCTAGAAAACAAGCAATGTAA 1002 0.4281 MAALQYLESLRSSHPELSDWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYNNFITDFETKINLLKLAHFAVMVSRRYSEKEAAIGYLEGVIEKLQATKEQRIEEPILYIKMQIALFKLEQGDQKECKNLLEDGKSTLDSMTDIDPTVYASYYWVSSQYHKSRQEFAEFYKSALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCQVHNAALRAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAERTKLSIEDVEHLLMKSLSVSSRKQAM. 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01257 333 ProSiteProfiles PCI domain profile. 174 333 IPR000717 -
Seca10g01257 333 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 4 326 IPR035298 -
Seca10g01257 333 Pfam PCI domain 238 322 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01257 Seca-Chr10 12456748 12463580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01257 K03039 - gmx:100804455 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01257 10 12456748 12463580 Seca10g01257 10 12456748 12463580 ECH