Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01253 ATGGACGAGAGCGACGACCTTCTAAACGACAATTGGGCGGATGACTTCCTCTTCCAGGTAATCCATCTCGAAGGGCTTGCCGTCTCTTCAACCAACCCTTCTTCAGTCTCTCACCCTCAACCCCAACCCCAACAACCGCTTCCTTTGGTCGCGGTTTCTACCTCCGACTCCAGTTCCTTTTCGCCTCCCCGGGAACTCTCTCAGAGGACCACACACTTAGGCTCTCGTCGTCTCTCTCCCCCTCGCCCTCCGAAACCCGATTCTGATAAAGACCTCGAAATTGAGCGGTTGAAGAGGGAGCTGGGACTTGCTTCAAAGCAGATTACAAGTCTGGAAAAGGAGTGTCTCAATTTAAAGAAAGAAAGAGACAAGAAAGAGGATCAGCTCAAATTCGTATTTTCCAAGAGTGAAGAAGAAAATCCTCGTACTAAAAGATCGAAAAGTGTAGACAAGGATTTTGGGATTCTTGCTCCCAACCATCATAAAATCTCTTCAAAATTTCAAAATGGAGTATCTTCAAATGATCCGACTGTTGAGACAACTGTTAAAGCTAAAAGAGTTAAAACAGAAATGGATAGCCATCAAGAAGCTCAAGGTTTTCTAAGCGATGATCTACCTGCTTATCATGACCTTTCCCAGAAGTTGCTGGCAGTATGGGGATCTCCAACTGACAAAAAGCTTGGAAGTAATGCGATATCCAAGTTGCTTGTGGGTTGTCAAAGAGATTTTCATATTCTTTTTGGCTGCATGAGCCTGCCTTCGGAAATAACACGAAAATTACTTCGGGACATTAGCTCTTCAGTAGTATATTTGCATTATGTCAAGGATTGTCTCCGTACTCCAGAAGCAGCAAAGGTGTCACATCTCTATTTTGCATTGACAAAGGTATTAGTTCAACTATGCATTTGGGCAAAGATAGCTGATGGAACAGATGTGTTGGAAACTTTGATAGAACCATTACTTGATCTATGTGGTATGGAAAATGTTGTTATTGTCCATAGCTCTCTATGTATACTGCACACTCTTCTGAAGCTCCTACTGGAATCTGAAAAGAATTTTGGAACAAGGGAAAATGTCTTCATTGAAGGAATTTGCACTGGGAAGGATCTTGTGGATTCTGGTGGGTTGGAAGATGTAAAAAATGGAAAGCTCTTCAATGAAGAAATACCAAGCAGGAAGGAGGGCTGGAACCATCCAAATGCCTCACAACCTCATGTAAATTGGCCTGATCTTTTTGAGATGGTGCATCACATTGCCATGAGGATCACAGAAGAAAGCGTGAGAGTGGAGGCAGCATCCATTATGAAGCTGCTTCTCCTGAGGAGTAATGCTTACTTTGAGAGGGAGCAGTTTAGCCAGAAAATAGTTTTTAGAACTATTTCAGAATTGCTTAAGAAGGATGCTGGGCTACGTGTAAAAAAACATGCTCTAAGACTTCTGTACCTAGTACTAAATTGA 1458 0.4266 MDESDDLLNDNWADDFLFQVIHLEGLAVSSTNPSSVSHPQPQPQQPLPLVAVSTSDSSSFSPPRELSQRTTHLGSRRLSPPRPPKPDSDKDLEIERLKRELGLASKQITSLEKECLNLKKERDKKEDQLKFVFSKSEEENPRTKRSKSVDKDFGILAPNHHKISSKFQNGVSSNDPTVETTVKAKRVKTEMDSHQEAQGFLSDDLPAYHDLSQKLLAVWGSPTDKKLGSNAISKLLVGCQRDFHILFGCMSLPSEITRKLLRDISSSVVYLHYVKDCLRTPEAAKVSHLYFALTKVLVQLCIWAKIADGTDVLETLIEPLLDLCGMENVVIVHSSLCILHTLLKLLLESEKNFGTRENVFIEGICTGKDLVDSGGLEDVKNGKLFNEEIPSRKEGWNHPNASQPHVNWPDLFEMVHHIAMRITEESVRVEAASIMKLLLLRSNAYFEREQFSQKIVFRTISELLKKDAGLRVKKHALRLLYLVLN. 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01253 485 SUPERFAMILY ARM repeat 273 482 IPR016024 -
Seca10g01253 485 Coils Coil 94 128 - -
Seca10g01253 485 PANTHER ATR INTERACTING PROTEIN 5 485 IPR044952 GO:0006974
Seca10g01253 485 MobiDBLite consensus disorder prediction 29 91 - -
Seca10g01253 485 MobiDBLite consensus disorder prediction 47 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01253 Seca-Chr10 12422994 12431465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01253 - - aprc:113870469 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01253 10 12422994 12431465 Seca10g01253 10 12422994 12431465 ECH