Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01249 ATGAATCGCCACCACGATCCCAATCCATTCGACGAAGAAGAAGTCAATCCTTTCTCGAATGGTGCTGCTCCTGGCTCAAAATCACGCATTCCACCATTGGCATCTGAACCACTAGGCTTTGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACTACAAATGACTCTAAGAAGAAAGGTCAAGAGCTAGCAGCTTGGGAAGCCGATTTAAAAAGGAGAGAGAAGGAAATAAAAAGAAGAGAAGATACTGTTTCCAGAGCTGGTGTACCTGTTGATGATAAGAATTGGCCTCCATTTTTCCCAATAATTCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGTCTAGTTTTTAATGTAGTTGCTGTGATTGTCTGTTGGATCAGAGGCGGCGGTGTGAAAATTTTTTTCCTTGCGGTGATTTATGCTCTGCTTGGCGTTCCCCTTTCATACGTGCTTTGGTACAGGCCCCTCTACCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACCTGCTTCATATAGCATTTTGCATCTTTGCTGCAATTGCGCCTCCAATTGTTTTTCATGGCAAATCATTAACGGGCATCCTTGCAGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGGTAAGTTGTATTCTATGTGCATATTAG 735 0.4272 MNRHHDPNPFDEEEVNPFSNGAAPGSKSRIPPLASEPLGFGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKRREKEIKRREDTVSRAGVPVDDKNWPPFFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGVSCILCAY. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01249 244 Coils Coil 65 85 - -
Seca10g01249 244 MobiDBLite consensus disorder prediction 1 60 - -
Seca10g01249 244 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 242 IPR007273 GO:0015031|GO:0016020
Seca10g01249 244 Pfam SCAMP family 96 243 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01249 Seca-Chr10 12368382 12377363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01249 1 237 Miscellaneous Gene Families AT1G32050 73.640 5.28e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01249 K19995 - gmx:100780723 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01249 10 12368382 12377363 Seca10g01249 10 12368382 12377363 ECH