Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01240 ATGGGAAAGAGTAAGGTTCTTGTTGTGGGGGGTACAGGGTATGTTGGGAAGAGGATAGTGAAGGCAAGTTTAGAAAAGGGGCATGAAACCTATGTCCTTCGACGTCCAGAGACAGGGCTCGACATTGACAAGGTGCAAATGTTGTTGTCATTCAAGAAACAAGGTGCTCATCTTGTGGAGGCTTCTTTCTCTGATCAACAAAGCCTTGTGGATGCTGTGAAACAAGTGGATGTTGTGATTTGCACCATGTCTGGGGTTCATTTCCGATCCCATAACTTACTGATGCAACTCAAACTTGTTGAGGCCATCAAAGCTGCTGGGAACATCAAGCGTTTCCTGCCTTCAGAATTTGGCATGGACCCAGCACTTATGGGACATGCACTTGAACCTGGAAGAGTCACATTCGATGAGAAAATGACTGTAAGGAAAGCAATTGAGGAAGCCAACATCCCATTCACTTACATCTCTGCCAATTGCTTTGCTGGCTACTTCGCTGGTAACCTCTCTCAGATGGGTACCCTCTTTCCTCCTACAGACAAAGTGCTTCTCTATGGTGATGGCAATGTTAAAGTTGTTTATATGGATGAAGATGATGTAGCGACATACACAATCAAGACAATTGATGATCCTCGAACATTGAACAAGACACTTTATCTAAGGCCACCAGAAAACATCCTTACTCAAAGAGAGCTAATTGAGAAATGGGAAAAACTTATAGGGAGGCAACTAGAAAAGTCCAGCATATCTGAACAAGACTTCCTTTCTTCCATCAAAGGTTTGGACTATGCAGGCCAAGTGGGGGTGGGGCACTTCTATCACATTTTCTATGAAGGGTGTTTGACAAACTTTGAAATTGGAGAAGATGGAGAAGAAGCCTCAGAGCTTTATCCAGAGAGAGGAGAGGCAATGGGGAAGAGCAAGGTTCTTGTTGTGGGGGGTAGTGGGTATATAGGGAGGAGGATAGTGAAGGCAAGTCTAGAACAGGGCCATGAAACCTATGTTCTTCAACGTCAAGAAACAGGGCTTGACATTGAAAAGGTGCAGATGTTGTTGTCATTCAAGAAGAAAGGTGCTCATCTCGTCGAGGCTTCTTTCTCTAATCACCAGAGCCTTGTGGATGCTGTGAAACAAGTGGATGTGGTGATTTGCACCATGTCTGGGGTTCATTTTCGATCTCATAACTTATTGATGCAACTCAAACTTGTTGAGGCCATCAAGGATGCAGGGAATTTCAAGCGTTTCCTACCTTCAGAATTTGGCATGGACCCATCACTCATGGGACATGCACTTGAACCTGGAAGAGTCTCATTCGATGAGAAAATGACTGTAAGGAAAGCAATTGAGAAAGCCAACATCCCTTTCACTTACATCTCTGCTAACTGCTTTGCTGGCTACTTTGCTGGTAACCTCTCTCAAATGGGTACCCTCTTTCCTCCTAGAGACAAAGTGCTTCTTTATGGTGACGGCAATGTCAAAGTTGTTTATATGGATGAAGATGATGTAGCAACATACACAATCAAGACAATTGATGATCCTCAAACATTGAACAAGACACTTTATCTAAGGCCACCAGAAAATATCCTTACTCAAAGAGAGCTAATTCAGAAGTGGGAAAAACTTATAGGGAAGCAACTACAAAAGTCCAGTATATCTGCACAAGATTTCCTTTCTTCCATCAAAGGTTTGGACTATGCAAGTCAAGTGGGAGTGGGGCATTACTATCATATTTTCTATGAAGGGTGTTTGACAAACTTTGAAATTGGAGAAGATGGAGAAGAAGCCTCAGAGCTTTATCCAGAAGTGAAGTACACACGCATGGATGAATACCTAAAAGTTTATGTGTGA 1845 0.4298 MGKSKVLVVGGTGYVGKRIVKASLEKGHETYVLRRPETGLDIDKVQMLLSFKKQGAHLVEASFSDQQSLVDAVKQVDVVICTMSGVHFRSHNLLMQLKLVEAIKAAGNIKRFLPSEFGMDPALMGHALEPGRVTFDEKMTVRKAIEEANIPFTYISANCFAGYFAGNLSQMGTLFPPTDKVLLYGDGNVKVVYMDEDDVATYTIKTIDDPRTLNKTLYLRPPENILTQRELIEKWEKLIGRQLEKSSISEQDFLSSIKGLDYAGQVGVGHFYHIFYEGCLTNFEIGEDGEEASELYPERGEAMGKSKVLVVGGSGYIGRRIVKASLEQGHETYVLQRQETGLDIEKVQMLLSFKKKGAHLVEASFSNHQSLVDAVKQVDVVICTMSGVHFRSHNLLMQLKLVEAIKDAGNFKRFLPSEFGMDPSLMGHALEPGRVSFDEKMTVRKAIEKANIPFTYISANCFAGYFAGNLSQMGTLFPPRDKVLLYGDGNVKVVYMDEDDVATYTIKTIDDPQTLNKTLYLRPPENILTQRELIQKWEKLIGKQLQKSSISAQDFLSSIKGLDYASQVGVGHYYHIFYEGCLTNFEIGEDGEEASELYPEVKYTRMDEYLKVYV. 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01240 614 PANTHER PINORESINOL REDUCTASE-RELATED 303 613 - -
Seca10g01240 614 Gene3D - 4 297 - -
Seca10g01240 614 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 305 559 IPR036291 -
Seca10g01240 614 CDD PCBER_SDR_a 307 609 IPR045312 GO:0016491
Seca10g01240 614 Pfam NmrA-like family 308 603 IPR008030 -
Seca10g01240 614 Pfam NmrA-like family 6 242 IPR008030 -
Seca10g01240 614 CDD PCBER_SDR_a 5 298 IPR045312 GO:0016491
Seca10g01240 614 Gene3D - 158 298 - -
Seca10g01240 614 Gene3D - 306 599 - -
Seca10g01240 614 Gene3D - 460 610 - -
Seca10g01240 614 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 258 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01240 Seca-Chr10 12291929 12310879 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01240 K21568 - gmx:100775382 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01240 10 12291929 12310879 Seca10g01240 10 12291929 12310879 ECH