Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01237 ATGAATAACAATCTTATACAGGAGATTGAGTTTCCCACAGCTGGACTCGCATCAGTACCAGGTGATGGGGAAGGTGGAATAGAGATGACTGAGAGCATGCAATTGATTCGTGAATTTTGTGACCGCTTCATTACTTCAGAGAAAACCACACGAACAAGAATATTTTTTCCAGAGGCTAGTGAAGTTGACTTTGCCAGACAATCAGTCTTTAGTGGAGCTTCTTTTAAGTTGGACTATCTGACAAAGCCATCATTTTTTGAAGATTTTGGTTTTGTTAAAAAAGTAAAAATGTCTGACAGAGTAAAGCCAGGAGATGAACTTTTCTTGGTAGCCTACCCATATTTTAATGTCAATGAAATGCTTGTTGTGGAAGAACTTTACAAAGAAGCGGTCTTGAACACTGAACGAAAGCTGATTATTTTCAATGGAGAACTTGATCGTATAAGATCTGGGTATTATCCACCATTCTTCTACCCAAAGCTTGCTGCACTTACTAAGTCCTTCCTACCGGTGATGGAAACAGTGTATTACATTCATAATTTCAAGGGCCGCAATGGAGGAACACTTTTCAGGTGCTATCCAGGACCTTGGAAGGTCCTCAGAAGAGTGGGGAGTAGTAGATATGTTTGTCTACATCAGCAGGATACTATGCCATCCCTCAAGGAAGTTGCCCTTGATATTCTTCCATCAACTTGA 696 0.4023 MNNNLIQEIEFPTAGLASVPGDGEGGIEMTESMQLIREFCDRFITSEKTTRTRIFFPEASEVDFARQSVFSGASFKLDYLTKPSFFEDFGFVKKVKMSDRVKPGDELFLVAYPYFNVNEMLVVEELYKEAVLNTERKLIIFNGELDRIRSGYYPPFFYPKLAALTKSFLPVMETVYYIHNFKGRNGGTLFRCYPGPWKVLRRVGSSRYVCLHQQDTMPSLKEVALDILPST. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01237 231 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 8 230 IPR044687 -
Seca10g01237 231 Pfam Domain of unknown function (DUF1995) 6 224 IPR018962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01237 Seca-Chr10 12265439 12268791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01237 - - psat:127119829 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01237 10 12265439 12268791 Seca10g01237 10 12265439 12268791 ECH