Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01235 ATGGTTTATGTTTTGTGTGTTTACAACAAGAAAGAAAAGTACCATCGAATTATGATGGCAGCATTTAACATCCAGGAGGCCCTAATCTGGAAGGAAAAAATTGAGTATGTAATTGATCAGCATCAGGGAGCACAACCATCAAATGGTAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAATGGGAAGACTGCTTCTTCATCAGACCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAAGATGAGTCTCATCCAAATTTGTTAAGGAGGACAACAATTGGAAATGGTCCTCCAGAATCAATTTTTGACTGGACACGAGAAATAGATTCAGATTTGTCAAATCAGAATATCAATAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAATGCCAAAACGGACTTCGTATTTTTGAAGAACTTCTTGAAGTTGATTACCTTCCAAGGAGCTGTAGCAGAGCTATGAAAGCAGTAGGTGTTGTGGAGGCCACTTGTGAAGAAATTTTTGAGCTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCAACATGGTAGTTTAGTTGAAGAGGTGGATGGGCATACCGCTGTTCTTTATCACCGACTTCAGCTGGACTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGTTACTGGCGCCGAAACGATGATGGAAGTTATGTTGTTTTATTTCGCTCTAGGGAACATGAGAACTGCAGTCCACAACCAGGATGGGTTCGGGCACATATTGAGAGTGGAGGATTTAATATTTCCCCATTAAAACCTCGAAATGGGAGGCCCAGGACACAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGGTGGGGCGTGGGTTACATGTCATCTTTTCAGCAGCATTGTCTCCGGCAAATTTTGAATAGTGTGGCTGGTTTACGTGAATGGTTTGCCCAAACAGATGAAAGGAATGCTCCTCCGCGAATTCCTGTAATGGTTAATATGTCCTCAACATCCGGTGCTTCAAAGAGTCTGAAGCCAAATGATTCTTCTGTCCATCCTACTTCTCTTGATCAAATAAATGCCGCAAGCAGAAATTCTGTTTTGTTGGATGAATATTCTGATGAAGATGAAGATTTTCAAATAGCAGAACCTGAGCAAGAGGTATTCCAAAATGGTCTTGAGAATGATACGAAAAAAACAGCCTTGGAAGAAGAACCGGAAAATGTGATTGACCTATCTTCCTTTTCGGGTAATTTACACCGAGATGATCGTGATAATGCTCGGGATTGCTGGAAAATTTCTGATGGAAATAACTTCAGAGTCAGAAGCAAGCATTTTTGCTATGACAAGTCAAAGGTTCCTGCGGGCAAACATCTGCTGGATCTCGTTGCTGTTGATTGGTTTAAGGACTCAAAAAGAATGGACCATGTGGCTAGACGTCATGGTTGTGCAGCACAAGTTGCATCAGAAAAGGGATTTTTCTCCGTTGTCATTAATCTTCAAGTGCCTGGATCAACACACTACAGTATGGTATTCTATTTTGTGACAAAGGAGTTAGTTCCTGGATCCCTCTTGCAACGCTTTGTTGATGGTGATGATGAATTCCGAAACAGCAGGTTTAAGCTCATCCCATCAGTCCCAAAGGGCTCATGGATTGTTCGCCAAAGTGTTGGAAGTACTCCTTGTTTACTGGGAAAGGCAGTTGATTGCAACTATATTCGTGGTCCCAAATATTTAGAAATTGATGTGGATATTGGTTCTTCTACTGTTGCTAATGGAGTTTTGGGATTGGTTATTGGTGTGATTACAACATTAGTGGTTGATATGGCTTTTCTTGTACAGGCAAATACTCCTGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGAATTTCTCATTTAGAGCTCAAATCTGCCATAGTCCCAAAACTGGATCCAGATCCATCATGA 1959 0.4176 MVYVLCVYNKKEKYHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDESHPNLLRRTTIGNGPPESIFDWTREIDSDLSNQNINNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCSFQHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGWVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYMSSFQQHCLRQILNSVAGLREWFAQTDERNAPPRIPVMVNMSSTSGASKSLKPNDSSVHPTSLDQINAASRNSVLLDEYSDEDEDFQIAEPEQEVFQNGLENDTKKTALEEEPENVIDLSSFSGNLHRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKVPAGKHLLDLVAVDWFKDSKRMDHVARRHGCAAQVASEKGFFSVVINLQVPGSTHYSMVFYFVTKELVPGSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTPDELPERLIGAVRISHLELKSAIVPKLDPDPS. 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01235 652 CDD START 121 292 - -
Seca10g01235 652 Pfam START domain 155 294 IPR002913 GO:0008289
Seca10g01235 652 SUPERFAMILY Bet v1-like 113 292 - -
Seca10g01235 652 MobiDBLite consensus disorder prediction 75 89 - -
Seca10g01235 652 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 434 637 IPR009769 -
Seca10g01235 652 MobiDBLite consensus disorder prediction 340 359 - -
Seca10g01235 652 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 1 647 IPR045096 -
Seca10g01235 652 SMART START_1 109 321 IPR002913 GO:0008289
Seca10g01235 652 MobiDBLite consensus disorder prediction 63 101 - -
Seca10g01235 652 ProSiteProfiles START domain profile. 129 311 IPR002913 GO:0008289
Seca10g01235 652 Gene3D - 129 329 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01235 Seca-Chr10 12248021 12261821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01235 - - gmx:100806401 1238.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01235 10 12248021 12261821 Seca10g01235 10 12248021 12261821 ECH