Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01203 ATGGCGATGGTGATGAGGCACGGTGGCACAGGGACTACCCAAGTGGCCAATACTGCGCTGAAACTGTTGGTGGCGAAGGGTTTAGGTGGCGCTGCTCCTAACAAATGGGATTTTAATGTAAGGAATTGGAGCACTTTGTCTGTGTCGACAGAGAAGAAGGCTGATACTGCTGCTGGTGCTGGAAACAAAGAGGTTGAGAGTTATTGGGGGATTCAACCCTCTAAGATTACCAAACAGGATGGCACAGAATGGAAATGGAATTGCTTCAGGCCATGGGAAACGTACACAGCAAACCTTTCTATTGATCTGAACAAACACCACCCGACGACGACGTTTGTCGACAAGATGGCTTATTGGACTGTCAAGACACTTAGATACCCCACTGATATATTTTTCCAGAGAAGGTATGGGTGCCGAGCAATGATGCTTGAGACTGTAGCAGCTGTTCCTGGCATGGTAGCAGGTCTGCTACTCCACTTGAAATCCCTACGAAGATTTGAGCACAGTGGTGGATGGATCAAAGCTCTGCTAGAAGAAGCAGAGAACGAGCGCATGCACTTAATGACCTTCATGGAAGTTTCAAAGCCCAGATGGTATGAGCGTGCTCTAGTCATAACTGTCCAAGGCGTTTTCTTCAATGCATATTTCTTAGGCTATATGCTCTCACCAAAATTTGCACACCGCATGGTTGGTTACCTTGAGGAGGAGGCAATACACTCCTACACAGAGTTCCTCAAGGAGTTGGACAAAGGTAAGATAGAAAATGTGCCAGCTCCAGCCATTGCCATAGACTATTGGCAGCTGCCACAAGGCTCTACTTTAAGGGATGTAGTCTTGGTTGTCAGAGCTGATGAAGCACATCATCGTGATGTTAACCACTTTGCATCGGACATATATTACCAAGGACGAGAGTTAAGAGAGGCTGCTGCTCCAATTGATTATCACTAG 948 0.4673 MAMVMRHGGTGTTQVANTALKLLVAKGLGGAAPNKWDFNVRNWSTLSVSTEKKADTAAGAGNKEVESYWGIQPSKITKQDGTEWKWNCFRPWETYTANLSIDLNKHHPTTTFVDKMAYWTVKTLRYPTDIFFQRRYGCRAMMLETVAAVPGMVAGLLLHLKSLRRFEHSGGWIKALLEEAENERMHLMTFMEVSKPRWYERALVITVQGVFFNAYFLGYMLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGKIENVPAPAIAIDYWQLPQGSTLRDVVLVVRADEAHHRDVNHFASDIYYQGRELREAAAPIDYH. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01203 315 Pfam Alternative oxidase 105 295 IPR002680 GO:0009916
Seca10g01203 315 Gene3D Alternative oxidase 62 312 IPR038659 -
Seca10g01203 315 CDD AOX 132 299 IPR002680 GO:0009916
Seca10g01203 315 PANTHER ALTERNATIVE OXIDASE 52 315 IPR002680 GO:0009916
Seca10g01203 315 FunFam Ubiquinol oxidase 68 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01203 Seca-Chr10 11833788 11835656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01203 28 315 Miscellaneous Gene Families AT3G22370 77.431 8.92e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01203 K17893 - gmx:547924 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01203 10 11833788 11835656 Seca10g01203 10 11833788 11835656 ECH