Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01201 ATGGAAGAAGCACTACTAGCGTTGAGTTGCAGTTCCAGTGGCAGTTACAGAATTGCCAAAGCTGGTGCGATTCCACTTCCATCAGTGTTGGTGTCACCACTTCACCGTCATCGTCTTCTTCGGAACAAGCGATTTTCACCTGCAATAATCGCTCTCAGAAAAAAGGGGTTCTGTGAGAAGTTTATATCCAAAATGGCTAATTATGAAGGACAGACGGTCACTAGTGGTAGCGATGTTAGATCAGGGAATATGATTTTTGTGCCTATTTTGGACGATGGAATTTTCCGATTTGATTGTTCTGAAAATGATAGAGGTGCAGCATATCCCAGTATTTCTTTTGTGAATAGCAGGGATAGAGAGACGCCCATCACTATTCACAAGGTTCCTTCATATACCCCTACTTTTGAGTGCCTTCTAGAGCAGCAAGTTGTCACACTTGAGCTGCCTTTAGGTTCCTCCCTCTATGGAACTGGAGAAGTTAGTGGGCAGCTCGAGAGGACGGGTAAAAGAGTTTTCACATGGAACACAGATGCATGGGGTTATGGTCCCGGAACTACATCCTTATACCAATCACATCCGTGGGTGTTAGCCATTCTTCCAAATGGCGAGGCACTAGGATTTCTTGCTGACACTACGAAGCGCTGTGAGATTGATCTGAGGAAAGAATCAACAATACGTTTTGTTGCTCCATCTTCGTATCCTGTCATTACATTTGGTCCTTTTGCTTCACCCACGGAAGTTCTGATATCTCTATCAAAAGCAATTGGAACTGTGTTTATGCCTCCAAAATGGTCATTAGGCTATCAACAATGCCGTTGGAGCTATTTATCTGATCAGAGAGTTTTGGAGGTTGCAAAAACATTCCGGGAAAAGCGCATACCTTGTGATGTGATATGGATGGATATCGATTACATGGATGGTTTTCGTTGTTTTACCTTTGACAAGGAGCGTTTTCGAGATCCCAAGTCTTTAGCAAAAGACCTCAATTATAGTGGGTTTAAAGCTATTTGGATGCTCGATCCCGGGATCAAGCAGGAAGAGGGTTATTTTGTATATGATAGTGGTTCTAAAAATGATGTTTGGGTCCAAAAGGCAGATGGAACACCTTTCGTTGGTAAGTTTTCTTTGTATATTAATACTTCTGCACTTCACACCTTCTTGTTCTTCTTTCCTTTTGGGGATGTGTGGCCTGGGCCTTGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGAGCATGGTGGGCAAATTTAGTTAAAGACTTCATTTCTAATGGTGTTGATGGTATATGGAATGATATGAATGAACCAGCTATCTTTAAGGTTGTAACGAAAACAATGCCTGAAAGCAATGTTCATAGAGGAGATGGTGAACTTGGAGGTCGTCGGAATCATTCTTTCTATCATAATGTGTATGGTTTGCTGATGGCAAGATCAACTTATGAAGGCATGAAACTAGCAAATGAAAATAGGCGTCCTTTTGTTCTCACCAGAGCTGGATTTATTGGCAGCCAAAGGTATGCTGCAACATGGACTGGAGATAATCTTTCTACCTGGGAGCACCTTCATATGAGTATCTCGATGGTACTTCAGCTGGGACTCAGTGGTCAGCCACTATCAGGTCCTGATATTGGTGGATTTGCTGGAAATGCAACACCAAGGCTTTTTGGAAGGTGGATGGGTGTAGGATCCTTGTTTCCTTTTTGCCGAGGGCATTCTGAGGCTGGCACCACTGACCATGAACCCTGGTCTTTTGGTGAAGAGTGTGAAGAAGTTTGTCGATTAGCATTGAAGAGGCGCTACCGCCTTATCCCACTTATCTACACACTTTTTTATTTTGCACATACAAGGGGCACTCCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAACTTGAAAATTCATTTTTGCTTGGTCCAGTTTTAGTATATGCAAGCACCTTACGCAGTCAGGGGTTGGATAAGTTGGAGTTTACTTTGCCTAAGGGGATATGGTTGGGTTTTGATTTCAATGATCCACATCCGGATTTGCCAGCTTTATATTTAAAAGGTGGCTCAATTATTCCTGTGGGTCTCCCTCTTCAGCATGTTGGAGAAGCTAATCCATCAGATGAGTTGACACTTCTTGTGGCTTTAGATGAATACGGGAAAGCTGAAGGTTTTCTATTTGAGGATGATGGCGATGGATATGAATTCACTAAAGGCAAATATTTATTAACACATTATGTGGCTGAACTTCAATCATCAGTTGTTACTGTGAGTGTGCACAAAACTGAAGGATCATGGGAAAGACCTAAACGCCGCCTCCATATTCAATTATTGCTAGGTGGGGGTGCAATGCTTGATACATGGGGAATGGATGGGGAAGTGTTGCAAGTTATTTTGCCTTCAGAAGAGGAGGTGTCGAAGCTGGTATCTACTAGTGAGAAGCAGTACAAGGAACATTTGGAAAAAGCAATTCAAATTCCTGATGTAGAAGAAGTTTCTGGAACCAAGGGAATGGAGCTTTCAAGAACTCCCATTGAACTTAAAAGTGGTGAGTGGATTCTTAAAGTTGTTCCCTGGATTGGGGGCAGAATCATCTCCATGATACACCTTCCTTCAGGAACACAATGGCTCCATAGCAGGATTGAGATAAATGGGTATGAGGAGTATAGTGGTACAGAGTATCGTTCTGCTGGGTGTTCTGAGGAATACTCTGTCATTGATCGAGAACTTAAGCATGCAGGAGAGGAGGAATCTGTGGTATTAGAGGGTGATATTGGTGGAGGATTGGTTCTTCAACGGCAGATCTGTTTTCCAAAAAATGCTGCTAATGTCATCCAGATAGACTCTAGCATAATAGCCAGCAACGTTGGAGCTGGTTCTGGAGGGTTCTCAAGGTTGGTCTGCTTAAGAGTTCACCCAACATTCTGTCTTTTGCACCCCTCAGAATCTTTTGTCTCGTTTACTTCAATTGATGGATCGAAGCATGAAGTCTTTCCTGATGATGGGGACCAAATCTTGGAAGGAAACCTTATTCCTAATGGTGAGTGGAGGCTCATTGATAAATGTCTTGGCTTCGCATTGGTCAATCGATTTAACGTTACTGAGGTATTCAAGTGTCTTGTTCACTGGGATTCTGGCACTGTCAACCTGGAGCTCTGGTCCGAGAACAGGCCTGTCTCAAAGCAATCCCCTCTCCGAATTTCCCATCAGTATGAGGTTATGAGAATTCCCTAA 3237 0.4306 MEEALLALSCSSSGSYRIAKAGAIPLPSVLVSPLHRHRLLRNKRFSPAIIALRKKGFCEKFISKMANYEGQTVTSGSDVRSGNMIFVPILDDGIFRFDCSENDRGAAYPSISFVNSRDRETPITIHKVPSYTPTFECLLEQQVVTLELPLGSSLYGTGEVSGQLERTGKRVFTWNTDAWGYGPGTTSLYQSHPWVLAILPNGEALGFLADTTKRCEIDLRKESTIRFVAPSSYPVITFGPFASPTEVLISLSKAIGTVFMPPKWSLGYQQCRWSYLSDQRVLEVAKTFREKRIPCDVIWMDIDYMDGFRCFTFDKERFRDPKSLAKDLNYSGFKAIWMLDPGIKQEEGYFVYDSGSKNDVWVQKADGTPFVGKFSLYINTSALHTFLFFFPFGDVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPAIFKVVTKTMPESNVHRGDGELGGRRNHSFYHNVYGLLMARSTYEGMKLANENRRPFVLTRAGFIGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGPDIGGFAGNATPRLFGRWMGVGSLFPFCRGHSEAGTTDHEPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTLRSQGLDKLEFTLPKGIWLGFDFNDPHPDLPALYLKGGSIIPVGLPLQHVGEANPSDELTLLVALDEYGKAEGFLFEDDGDGYEFTKGKYLLTHYVAELQSSVVTVSVHKTEGSWERPKRRLHIQLLLGGGAMLDTWGMDGEVLQVILPSEEEVSKLVSTSEKQYKEHLEKAIQIPDVEEVSGTKGMELSRTPIELKSGEWILKVVPWIGGRIISMIHLPSGTQWLHSRIEINGYEEYSGTEYRSAGCSEEYSVIDRELKHAGEEESVVLEGDIGGGLVLQRQICFPKNAANVIQIDSSIIASNVGAGSGGFSRLVCLRVHPTFCLLHPSESFVSFTSIDGSKHEVFPDDGDQILEGNLIPNGEWRLIDKCLGFALVNRFNVTEVFKCLVHWDSGTVNLELWSENRPVSKQSPLRISHQYEVMRIP. 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01201 1078 Gene3D - 690 827 IPR013780 -
Seca10g01201 1078 SUPERFAMILY (Trans)glycosidases 253 617 IPR017853 -
Seca10g01201 1078 Gene3D Glycosidases 259 601 - -
Seca10g01201 1078 Pfam Domain of unknown function (DUF5110) 710 779 IPR033403 -
Seca10g01201 1078 CDD GH31_glucosidase_II_MalA 256 617 - -
Seca10g01201 1078 CDD GH31_N 144 256 - -
Seca10g01201 1078 PANTHER ALPHA-GLUCOSIDASE 147 758 - -
Seca10g01201 1078 Pfam Glycosyl hydrolases family 31 243 693 IPR000322 GO:0004553|GO:0005975
Seca10g01201 1078 SUPERFAMILY Galactose mutarotase-like 85 224 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca10g01201 1078 SUPERFAMILY Glycosyl hydrolase domain 619 677 - -
Seca10g01201 1078 Pfam Galactose mutarotase-like 153 218 IPR025887 -
Seca10g01201 1078 Gene3D glycosyl hydrolase (family 31) 107 239 - -
Seca10g01201 1078 Gene3D - 602 684 IPR013780 -
Seca10g01201 1078 ProSitePatterns Glycosyl hydrolases family 31 active site. 428 435 IPR030458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01201 Seca-Chr10 11792209 11812428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01201 78 1078 Glycoside Hydrolase AT3G23640 72.527 0.0 1563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01201 - - gmx:100809690 1860.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01201 10 11792209 11812428 Seca10g01201 10 11792209 11812428 ECH