Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01199 ATGGCTAACAACACATCCACTACTCTACAATCCGGCGATGACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCACCAAACGCCAAAAGCTTCACCACCACCACCACCAGCAACAGCCTCTCATACCAGGCCTCCCTGATCACATAGCCCAACTCTGCCTCTATAACATTCACCCTTCACTTCTCTCCAAAGTCTGCCACTCTTGGCGTCGCCTCATCTATTCCCCTTCTTTCCCTCCTTTCCTTTCTCTTTACGCCATTCTATCTCCACCCAAATTACCATCACACCCACCATTCCCTCCAACTTCACACTCCTATTCCCAATCTATTCAATTCTACAACTTCGATCCAATCTCAACCAAATGGAACATCCTCCCTCCTCCACCACCTGACCCACCCCTCCACCACCTCCTCCTCCGCCACCCTTCCTTCCTCTCCCGCAACCTCCCCATCCAATCCATCTCCGTCGCCGGAAACCTCATCCTCCTCGCCGCCACCACCCACAACCTCTCCCCTGCACTCTCTCGCCCTTTGATTTTCAACCCCCTCTCTCACAGCTGGACCTTCGGTCCCCCACTCCCCAGTCCCCGCCGATGGTGCGCCGTCGGCTCCTCCGGCGGCGCCGTCTACGTCGCCAGCGGAATCGGGACACACTTCTCCATCGACGTGGCGAAATCGATGGAGAAGTGGGACTTACACACAGAGCACAATTGGGAGAAGAAAACAGAGCTGAAGGATGGAAGGTTCAGCAGGGAAGCCATAGATGCGGTTGGATGGAAAGGGAAATTGTGCATGGTGAACGTGAAGGGTGATGCGGCGAAGGAAGGGGTAGTGTATGACGTGAAAGAGGACACGTGGAAGGAGATGCCGGAGGGGATGTTGTTGGGGTGGAGAGGACCAGTGGCGGCGATGGAGGAGGAGGTGATGTATGTGGTGGATGAAGTGAAAGGTGTTTTGAGAAAATACGTGGCTGAAGAAGATGCTTGGGAAGAGGTTTTAGAATCGGAGAGGCTCAAAGGAGCTGAACAACTCGTTGCTGAAAGAGGCAGAGTCTGTGTCGTTTCCTCCGGCAGGATTTCCGTCGTTGATGTCTCGGCGGCGCCGCCGAGGATCTCGGTGGTGGAATTGCCTCAAGGGTTTGAAGCAGTGGCTGTTCACATCTTGCCCAGGATGCCGGCAACTGAGTTTTCTGTCCAATGTTGA 1203 0.5495 MANNTSTTLQSGDDSSSSSSSSSSATKRQKLHHHHHQQQPLIPGLPDHIAQLCLYNIHPSLLSKVCHSWRRLIYSPSFPPFLSLYAILSPPKLPSHPPFPPTSHSYSQSIQFYNFDPISTKWNILPPPPPDPPLHHLLLRHPSFLSRNLPIQSISVAGNLILLAATTHNLSPALSRPLIFNPLSHSWTFGPPLPSPRRWCAVGSSGGAVYVASGIGTHFSIDVAKSMEKWDLHTEHNWEKKTELKDGRFSREAIDAVGWKGKLCMVNVKGDAAKEGVVYDVKEDTWKEMPEGMLLGWRGPVAAMEEEVMYVVDEVKGVLRKYVAEEDAWEEVLESERLKGAEQLVAERGRVCVVSSGRISVVDVSAAPPRISVVELPQGFEAVAVHILPRMPATEFSVQC. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01199 400 Gene3D - 96 353 IPR015915 GO:0005515
Seca10g01199 400 MobiDBLite consensus disorder prediction 1 26 - -
Seca10g01199 400 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP25 20 395 - -
Seca10g01199 400 MobiDBLite consensus disorder prediction 1 41 - -
Seca10g01199 400 SUPERFAMILY Kelch motif 109 355 IPR015915 GO:0005515
Seca10g01199 400 Pfam Kelch motif 151 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01199 Seca-Chr10 11757795 11758997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01199 - - cam:101502823 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01199 10 11757795 11758997 Seca10g01199 10 11757795 11758997 ECH