Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01196 ATGACGCGGGGAAAGCAGAAGATCGATGCGCAGAAGCGAAACGCAGAGAAGAATCAGAAGCAAAAGGGGTCTCAGCTTGAGGCCAGAGCCGTTGGCCTCAAAGTCGTCTGTCCCATCTGCAAGGTACAACTTGCAAATCAAAACCAGCTTGTTGATCATTATGGCTCCAAACATCCGAAGGAGAAACCTCCTACAGAGTCAGGCTAG 207 0.5024 MTRGKQKIDAQKRNAEKNQKQKGSQLEARAVGLKVVCPICKVQLANQNQLVDHYGSKHPKEKPPTESG. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01196 68 PANTHER GEO09665P1-RELATED 1 65 IPR045230 -
Seca10g01196 68 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 63 IPR013087 -
Seca10g01196 68 MobiDBLite consensus disorder prediction 1 27 - -
Seca10g01196 68 Pfam Zinc-finger of C2H2 type 37 57 - -
Seca10g01196 68 ProSitePatterns Zinc finger C2H2 type domain signature. 37 58 IPR013087 -
Seca10g01196 68 Gene3D - 1 66 IPR026939 -
Seca10g01196 68 MobiDBLite consensus disorder prediction 1 23 - -
Seca10g01196 68 Pfam 4F5 protein related disordered region 1 28 IPR007513 -
Seca10g01196 68 SUPERFAMILY Expressed protein At2g23090/F21P24.15 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01196 Seca-Chr10 11732759 11736922 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01196 - - mus:103973122 129.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01196 10 11732759 11736922 Seca10g01196 10 11732759 11736922 ECH