Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01184 ATGCTAAAAGCTTTAGCTGCGCTTCCTCAAACACCCTCTCTCACCAGTGTTGTGAGGAAGATGAGCTCGTCGCCAGTATTTCCTAAGTTCGTTTCTGTAGAAGGCGCCGATATACATTCCAGAAGTAAACCTGATGGCTTCAGATTCAGCCTTGTCTCGTATAACATATTGGCTCAGGTTTACGTGAAGAGCTCTCTGTTCCCACACTCTCCTTCCTCGTCTCTGAAGTGGAAATCTCGTTCAAGCTCAATTTTGGAAGTTATCAAGAACCTGGGAGCTGATTTTTTCTGCTTGCAGGAAGTTGATGAGTTTGATAGCTTTTACAAAGGAAACATGCAGGAACTAGGATATTCTTCTATTTATATGAAGAGAAGTGGTCAGAAGCGTGATGGCTGTGGCTTATTTTACAAGCATGACCGCGCAGAGTTGGTCTTAGAGGAGAAAATTGAATACAATGATCTTGTAAAGTCAATTCAAGATGGGAACTCTTCAAATGATGATGAACCCAACAATGACCAGAGAGTCCAGCCAGATAAACAAAAGGATGTTGCACCCAAAAATGGACCTAAATCGGGTGCAGAAGATCGTGGAGATCCCAATGATCCTCGTGTGAGACTAAAGCGTGATTGTGTAGGAATTCTTGCTGCTTTCAAATTCAAAGATCCCTCTAATATTATTATTGTGGCTAACACACATCTCTATTGGGATGCTGAGTGGGCTGATGTCAAGCTCGCACAAGCTAAATATCTCCTATCTCGCTTAGCACAATTTAAAACACTGGTATCAAATAGATATGAATGCACACCTGAAGTCATTGTGGCTGGTGACTTCAATTCTACACCAGGAGATATGGTTTATCAGTACCTCTTATCAGGCAATCCTTCCTCAGAACTGATGCCTGACTGTATAGAGGAGCGTCCTATTCCCTTATGTAGTGTCTATGCTTCTACAAGAGGAGAGCCACCATTTACAAACTACACACCTGGCTTCACTGGAACACTAGATTATATATTGTTTTGCCCTTCTGACTACATTAAACCAATTAGTTTTCTTGAGCTTCCAGATTCCAATGCAGCTGATATTGTTGGTGGACTGCCAAACTTCAGTCATCCTAGTGATCACCTACCAATAGGAGCTGAATTTGAAATCGTCAAGGAATAA 1161 0.4186 MLKALAALPQTPSLTSVVRKMSSSPVFPKFVSVEGADIHSRSKPDGFRFSLVSYNILAQVYVKSSLFPHSPSSSLKWKSRSSSILEVIKNLGADFFCLQEVDEFDSFYKGNMQELGYSSIYMKRSGQKRDGCGLFYKHDRAELVLEEKIEYNDLVKSIQDGNSSNDDEPNNDQRVQPDKQKDVAPKNGPKSGAEDRGDPNDPRVRLKRDCVGILAAFKFKDPSNIIIVANTHLYWDAEWADVKLAQAKYLLSRLAQFKTLVSNRYECTPEVIVAGDFNSTPGDMVYQYLLSGNPSSELMPDCIEERPIPLCSVYASTRGEPPFTNYTPGFTGTLDYILFCPSDYIKPISFLELPDSNAADIVGGLPNFSHPSDHLPIGAEFEIVKE. 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01184 386 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 25 383 - -
Seca10g01184 386 Pfam Endonuclease/Exonuclease/phosphatase family 52 342 IPR005135 GO:0003824
Seca10g01184 386 SUPERFAMILY DNase I-like 48 383 IPR036691 -
Seca10g01184 386 Gene3D Endonuclease/exonuclease/phosphatase 21 386 IPR036691 -
Seca10g01184 386 MobiDBLite consensus disorder prediction 171 203 - -
Seca10g01184 386 MobiDBLite consensus disorder prediction 158 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01184 Seca-Chr10 11627127 11632184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01184 K12603 - gmx:100775932 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01184 10 11627127 11632184 Seca10g01184 10 11627127 11632184 ECH