Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01151 ATGGCAGAGGTTAGGGTTTTCGGAGCACGTGCCGGCAGAGCACTCATGGCGGCGGCCGCATCCGCAGCGAAGGGCGCAGTCAAGAAGGCTGCTGCGTCCGGCGGAGCCGCCACCACAACCACAGCGAAGAAGACAGTCTCGAGCAGGGTCAACAACGGAGGCATACAGAAGGTGGTTCCAGTCTCTTCCGAGCTCGGCAAGTTCCTCGGCTCGCCTGAAGTCTCTAGAACCGACGCCGTCAAGAGAGTCTGGGAATACATTAAGCTGCAAAACCTTCAGAATCCTACAAATAAGAAGGAGATCTTTTGTGATGAAAAGCTGAAGACCATTTTTGGTGGGAAAGATAAAGTAGGATTCACAGAGATTGCCAGATTGCTGTCTAACCATTTTGCAAAATCGGGCTGA 405 0.5284 MAEVRVFGARAGRALMAAAASAAKGAVKKAAASGGAATTTTAKKTVSSRVNNGGIQKVVPVSSELGKFLGSPEVSRTDAVKRVWEYIKLQNLQNPTNKKEIFCDEKLKTIFGGKDKVGFTEIARLLSNHFAKSG. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01151 134 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 25 130 - -
Seca10g01151 134 Gene3D SWIB/MDM2 domain 48 134 IPR036885 -
Seca10g01151 134 ProSiteProfiles SWIB/MDM2 domain profile. 54 132 IPR003121 -
Seca10g01151 134 CDD SWIB-MDM2_like 59 130 - -
Seca10g01151 134 SUPERFAMILY SWIB/MDM2 domain 48 132 IPR036885 -
Seca10g01151 134 SMART swib_2 55 134 IPR019835 -
Seca10g01151 134 Pfam SWIB/MDM2 domain 59 130 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01151 Seca-Chr10 11128800 11130430 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Seca10g01151 SWIB 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01151 - - gmx:100779127 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01151 10 11128800 11130430 Seca10g01151 10 11128800 11130430 ECH