Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01150 ATGGAGGGCGAGGAAGGAGGTGGCATGAGGCTTAGCAAGAGAATCTCCAACGGAGAAGTTGACTACAAGAACAAATCCGGCACCGCATGGAGCCACTCTTACCTCAACCAGAAGCCATGGCACCCTCTCTCTTACCCCAACCAACGCCGCAAGTGGATCGCCGAACAAACCCACTCCCAGCGCCAACGCCGTGCCGAAGAGGTCGCTCGTGAGTATGCTCAGGAGCAAGAATTCTATCGCCAGACCGCTCTCATCTCCAAGAAGGACAAGGAAAAGGTGGAACTGATGCAAGCTGTTAGTTTTATGTATGTTCGTCCACCTGGTTATAATGCTGAAAGTGCCAAGGCTGCGGAGATGAATGATCAGAAGAAAAAAGAGGATATGATGAGTGGGGAGCCTCCACATACAAATGCTGATGGACCTTCCTCTTCATTCTTACCTCATAGGCCAACGAGTTCTTCGCATTTGAATGGAGAGAAGAAAAAACCGAGGCCAAAAGATGTCTTCGGGCGTCCTCTGCCAACTGAAGAAGAGTTTGAAATCCTTAAAAATGCGCCAAGGCTGGAAACAGGAGTTCCTGGCAGGGTAAAACCTTTTGGAGTCGAAGTACGCAATGTAAAATGTTTAAGATGTGGGAACTATGGTCACCAAAGTGGTGATCGTGAATGTCCCTTGAAGGATGCTATAATGCCTAATGAGGAGAGCAGATTGAAAAGAGATGACCCCTTGAATGCTATCCTTGCCCACACAGATCCTACCGAGCCTTTGAAATGGGAGCTCAAGCAGAAGCCAGGAATCAGTCCTCCTCGTGGAGGGTTCAAACCAGATGACCCCAACCAGCAGATAGTTGCTGATGACATATTTGATGAGTATGGAGGTTTTCTCAATATGGATAATATCCCTGATTTATTGACCAACTTCTCTAAGAAACCAAAAAAATCCAAAAAGAGCAAGCACAAAAAGCAGAAACTGGTACATTCAGACAGTGAAGCAACTTCTGATGATGGAGAGAGAAGGTCTAAGAAAAAAAAGGTTAAGGCAAACAGAAAGAAGAGAGATCACACAAAGTCAAGTTCATCAGACACTTCAGTCTCAGAAAAAGATCATGGAAAGAGCAGACACAAGAGTTCCTATTCATCAGAAGATTCTGACAGTGACAGGAATGATAGGAGTAGAAGGACTAAACCAGAGCATTCCTTTTCGCCCAAAGGTTCTGATCATCCTAGGCACAGTAGGAGTAAACATGGCAGACGAAGGCATTCCCTTTCACCCGAGGGGTCTGTTCCTGATGGTTACCACAGAAGTTACAAGAACAGTGATAAGCATTTTTATTCATCTGAAGATTCTGATAGTGACAAGGATGATCGAAGTAGAAAGAAGATACAAAAACACAAGAGGAAGCATAGTAGAAAAGGACATTCTTATTCATCCGAGGATTCTGGTCCTGCTGGTTATCATGCATACCACAAGAACAGAGACGAACATTTTTATTCATCGGATGATTCTAATCATCAAAGACAACCCAAGGTTAAAAGGAGCAGCCATAAGCACTCATCAAGAGCCTATTGTGATTCTCAAAAACATAACAGAAATTATAGTCCTGATCGCTGCCATGGAAGGCAGAGGAGCAGAGCTGAGCATTCTTATTCTTCTGAAGATTCTGATGTTGAAAAGGATGATCAGAGTAGAAGGATCAAACAAAAGCATTGCAGTACGCCCAAGGGCTCTGAACATCCTGAACATGATATGAGTAAACAGAAAAGAAAAAAGCACTGTTATTCATCTAAGGATTCCAGTGCTGATGGATATCATAGAAGTGGAAAGAGCAGATATGAGCGTTCTTATTCATCAGATGATTCTAATCATCATGAAAAACATCATAAACTGAGAAAGAGCAGCCACAAGCGTTGA 1911 0.4364 MEGEEGGGMRLSKRISNGEVDYKNKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHSQRQRRAEEVAREYAQEQEFYRQTALISKKDKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDQKKKEDMMSGEPPHTNADGPSSSFLPHRPTSSSHLNGEKKKPRPKDVFGRPLPTEEEFEILKNAPRLETGVPGRVKPFGVEVRNVKCLRCGNYGHQSGDRECPLKDAIMPNEESRLKRDDPLNAILAHTDPTEPLKWELKQKPGISPPRGGFKPDDPNQQIVADDIFDEYGGFLNMDNIPDLLTNFSKKPKKSKKSKHKKQKLVHSDSEATSDDGERRSKKKKVKANRKKRDHTKSSSSDTSVSEKDHGKSRHKSSYSSEDSDSDRNDRSRRTKPEHSFSPKGSDHPRHSRSKHGRRRHSLSPEGSVPDGYHRSYKNSDKHFYSSEDSDSDKDDRSRKKIQKHKRKHSRKGHSYSSEDSGPAGYHAYHKNRDEHFYSSDDSNHQRQPKVKRSSHKHSSRAYCDSQKHNRNYSPDRCHGRQRSRAEHSYSSEDSDVEKDDQSRRIKQKHCSTPKGSEHPEHDMSKQKRKKHCYSSKDSSADGYHRSGKSRYERSYSSDDSNHHEKHHKLRKSSHKR. 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01150 636 MobiDBLite consensus disorder prediction 154 173 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 517 625 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 260 280 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 323 341 - -
Seca10g01150 636 SMART Cir_N_3 39 75 IPR019339 -
Seca10g01150 636 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 40 75 IPR019339 -
Seca10g01150 636 MobiDBLite consensus disorder prediction 109 173 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 434 458 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 485 508 - -
Seca10g01150 636 PANTHER CBF1 INTERACTING COREPRESSOR CIR 8 472 IPR040014 GO:0003714
Seca10g01150 636 MobiDBLite consensus disorder prediction 299 636 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 136 153 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 117 132 - -
Seca10g01150 636 MobiDBLite consensus disorder prediction 354 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01150 Seca-Chr10 11122135 11127653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g01150 - K06066 gmx:100788280 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01150 10 11122135 11127653 Seca10g01150 10 11122135 11127653 ECH